Literature DB >> 17514571

A new approach to QSAR modelling of acute toxicity.

A A Lagunin1, A V Zakharov, D A Filimonov, V V Poroikov.   

Abstract

A new QSAR approach based on a Quantitative Neighbourhoods of Atoms description of molecular structures and self-consistent regression was developed. Its prediction accuracy, advantages and limitations were analysed from three sets of published experimental data on acute toxicity: 56 phenylsulfonyl carboxylates for Vibrio fischeri; 65 aromatic compounds for the alga Chlorella vulgaris and 200 phenols for the ciliated protozoan Tetrahymena pyriformis. According to our findings, the proposed approach provides a good correlation and prediction accuracy (r(2) = 0.908 and Q(2) = 0.866) for the set of 56 phenylsulfonyl carboxylates and the 65 aromatic compounds tested on C. vulgaris (r(2) = 0.885, Q(2) = 0.849). For the 200 phenols tested on T. pyriformis, the prediction accuracy was r(2) = 0.685 and Q(2) = 0.651. This is at least as good as the best results obtained with the other QSAR methods originally used on the same data sets.

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Year:  2007        PMID: 17514571     DOI: 10.1080/10629360701304253

Source DB:  PubMed          Journal:  SAR QSAR Environ Res        ISSN: 1026-776X            Impact factor:   3.000


  13 in total

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Authors:  Rajarshi Guha; Stephan C Schürer
Journal:  J Comput Aided Mol Des       Date:  2008-02-19       Impact factor: 3.686

Review 2.  Modeling kinetics of subcellular disposition of chemicals.

Authors:  Stefan Balaz
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

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Authors:  Artem Cherkasov; Eugene N Muratov; Denis Fourches; Alexandre Varnek; Igor I Baskin; Mark Cronin; John Dearden; Paola Gramatica; Yvonne C Martin; Roberto Todeschini; Viviana Consonni; Victor E Kuz'min; Richard Cramer; Romualdo Benigni; Chihae Yang; James Rathman; Lothar Terfloth; Johann Gasteiger; Ann Richard; Alexander Tropsha
Journal:  J Med Chem       Date:  2014-01-06       Impact factor: 7.446

4.  Quantitative prediction of antitarget interaction profiles for chemical compounds.

Authors:  Alexey V Zakharov; Alexey A Lagunin; Dmitry A Filimonov; Vladimir V Poroikov
Journal:  Chem Res Toxicol       Date:  2012-11-02       Impact factor: 3.739

5.  Modeling the toxicity of chemical pesticides in multiple test species using local and global QSTR approaches.

Authors:  Nikita Basant; Shikha Gupta; Kunwar P Singh
Journal:  Toxicol Res (Camb)       Date:  2015-12-10       Impact factor: 3.524

6.  A preclinical report of a cobimetinib-inspired novel anticancer small-molecule scaffold of isoflavones, NSC777213, for targeting PI3K/AKT/mTOR/MEK in multiple cancers.

Authors:  Bashir Lawal; Wen-Cheng Lo; Ntlotlang Mokgautsi; Maryam Rachmawati Sumitra; Harshita Khedkar; Alexander Th Wu; Hsu-Shan Huang
Journal:  Am J Cancer Res       Date:  2021-06-15       Impact factor: 6.166

7.  A new approach to radial basis function approximation and its application to QSAR.

Authors:  Alexey V Zakharov; Megan L Peach; Markus Sitzmann; Marc C Nicklaus
Journal:  J Chem Inf Model       Date:  2014-02-28       Impact factor: 4.956

8.  QSAR modeling of imbalanced high-throughput screening data in PubChem.

Authors:  Alexey V Zakharov; Megan L Peach; Markus Sitzmann; Marc C Nicklaus
Journal:  J Chem Inf Model       Date:  2014-02-28       Impact factor: 4.956

9.  Design, synthesis and pharmacological evaluation of novel vanadium-containing complexes as antidiabetic agents.

Authors:  Elena V Fedorova; Anna V Buryakina; Alexey V Zakharov; Dmitry A Filimonov; Alexey A Lagunin; Vladimir V Poroikov
Journal:  PLoS One       Date:  2014-07-24       Impact factor: 3.240

10.  Comparison of Quantitative and Qualitative (Q)SAR Models Created for the Prediction of Ki and IC50 Values of Antitarget Inhibitors.

Authors:  Alexey A Lagunin; Maria A Romanova; Anton D Zadorozhny; Natalia S Kurilenko; Boris V Shilov; Pavel V Pogodin; Sergey M Ivanov; Dmitry A Filimonov; Vladimir V Poroikov
Journal:  Front Pharmacol       Date:  2018-10-10       Impact factor: 5.810

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