Literature DB >> 17494754

Between "design" and "bricolage": genetic networks, levels of selection, and adaptive evolution.

Adam S Wilkins1.   

Abstract

The extent to which "developmental constraints" in complex organisms restrict evolutionary directions remains contentious. Yet, other forms of internal constraint, which have received less attention, may also exist. It will be argued here that a set of partial constraints below the level of phenotypes, those involving genes and molecules, influences and channels the set of possible evolutionary trajectories. At the top-most organizational level there are the genetic network modules, whose operations directly underlie complex morphological traits. The properties of these network modules, however, have themselves been set by the evolutionary history of the component genes and their interactions. Characterization of the components, structures, and operational dynamics of specific genetic networks should lead to a better understanding not only of the morphological traits they underlie but of the biases that influence the directions of evolutionary change. Furthermore, such knowledge may permit assessment of the relative degrees of probability of short evolutionary trajectories, those on the microevolutionary scale. In effect, a "network perspective" may help transform evolutionary biology into a scientific enterprise with greater predictive capability than it has hitherto possessed.

Mesh:

Year:  2007        PMID: 17494754      PMCID: PMC1876434          DOI: 10.1073/pnas.0701044104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

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Authors: 
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Review 5.  A genomic regulatory network for development.

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Journal:  Science       Date:  2002-03-01       Impact factor: 47.728

6.  Eya protein phosphatase activity regulates Six1-Dach-Eya transcriptional effects in mammalian organogenesis.

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Review 7.  The evolution of transcriptional regulation in eukaryotes.

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Journal:  Nat Rev Genet       Date:  2001-11       Impact factor: 53.242

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  22 in total

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4.  The Evolving Definition of the Term "Gene".

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Review 5.  Developmental Bias and Evolution: A Regulatory Network Perspective.

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6.  Hybrid incompatibility arises in a sequence-based bioenergetic model of transcription factor binding.

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7.  Generating anatomical variation through mutations in networks - implications for evolution.

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Review 8.  Constraints and plasticity in genome and molecular-phenome evolution.

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10.  Making the right connections: biological networks in the light of evolution.

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