Literature DB >> 17477556

Tag-mass: specific molecular imaging of transcriptome and proteome by mass spectrometry based on photocleavable tag.

R Lemaire1, J Stauber, M Wisztorski, C Van Camp, A Desmons, M Deschamps, G Proess, I Rudlof, A S Woods, R Day, M Salzet, I Fournier.   

Abstract

MALDI tissue imaging of tissues has become a promising technique for tracking biomarkers while determining their location and structural characterization. We have now developed specific targeting probes (oligonucleotides, antibodies), named Tag-Mass. This approach is based on probes modified with a photocleavable linker coupled with a tag cleaved and detected using mass spectrometry. Tag-Mass development is the key for a rapid, sensitive, and accurate approach to correlate levels of expression of different mRNA or proteins in diseases.

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Year:  2007        PMID: 17477556      PMCID: PMC2947822          DOI: 10.1021/pr0700044

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  19 in total

1.  Photocleavable peptide-DNA conjugates: synthesis and applications to DNA analysis using MALDI-MS.

Authors:  J Olejnik; H C Lüdemann; E Krzymanska-Olejnik; S Berkenkamp; F Hillenkamp; K J Rothschild
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

Review 2.  Recent developments in signal amplification methods for in situ hybridization.

Authors:  Xiang Qian; Ricardo V Lloyd
Journal:  Diagn Mol Pathol       Date:  2003-03

3.  Direct analysis of neuropeptides by in situ MALDI-TOF mass spectrometry in the rat brain.

Authors:  Isabelle Fournier; Robert Day; Michel Salzet
Journal:  Neuro Endocrinol Lett       Date:  2003 Feb-Apr       Impact factor: 0.765

4.  Nonradioactive in situ hybridization with digoxigenin.

Authors:  J L Rees; C Fisher
Journal:  Trends Genet       Date:  1992-01       Impact factor: 11.639

Review 5.  Profiling and imaging proteins in tissue sections by MS.

Authors:  Pierre Chaurand; Sarah A Schwartz; Richard M Capriolo
Journal:  Anal Chem       Date:  2004-03-01       Impact factor: 6.986

6.  Cellular localization of proenkephalin mRNA in rat brain: gene expression in the caudate-putamen and cerebellar cortex.

Authors:  B D Shivers; R E Harlan; G J Romano; R D Howells; D W Pfaff
Journal:  Proc Natl Acad Sci U S A       Date:  1986-08       Impact factor: 11.205

7.  Comparison of IR- and UV-matrix-assisted laser desorption/ionization mass spectrometry of oligodeoxynucleotides.

Authors:  E Nordhoff; F Kirpekar; M Karas; R Cramer; S Hahner; F Hillenkamp; K Kristiansen; P Roepstroff; A Lezius
Journal:  Nucleic Acids Res       Date:  1994-07-11       Impact factor: 16.971

8.  HER-2/neu in breast cancer: a comparative study between histology, immunohistochemistry, and molecular technique (FISH).

Authors:  Elisa Rossi; Alessandro Ubiali; Moris Cadei; Piera Balzarini; Ernestina Valagussa; Laura Lucini; Franco Alpi; Anna Galletti; Lucia Fontana; Chiara Tedoldi; Piergiovanni Grigolato
Journal:  Appl Immunohistochem Mol Morphol       Date:  2006-06

9.  Carboxypeptidase D is a potential candidate to carry out redundant processing functions of carboxypeptidase E based on comparative distribution studies in the rat central nervous system.

Authors:  W Dong; L D Fricker; R Day
Journal:  Neuroscience       Date:  1999       Impact factor: 3.590

10.  Molecular imaging of biological samples: localization of peptides and proteins using MALDI-TOF MS.

Authors:  R M Caprioli; T B Farmer; J Gile
Journal:  Anal Chem       Date:  1997-12-01       Impact factor: 6.986

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  12 in total

Review 1.  Mass spectrometric imaging for biomedical tissue analysis.

Authors:  Kamila Chughtai; Ron M A Heeren
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

Review 2.  Proteomic studies on the development of the central nervous system and beyond.

Authors:  Chenggang Zhang
Journal:  Neurochem Res       Date:  2010-06-25       Impact factor: 3.996

Review 3.  MALDI imaging mass spectrometry: state of the art technology in clinical proteomics.

Authors:  Julien Franck; Karim Arafah; Mohamed Elayed; David Bonnel; Daniele Vergara; Amélie Jacquet; Denis Vinatier; Maxence Wisztorski; Robert Day; Isabelle Fournier; Michel Salzet
Journal:  Mol Cell Proteomics       Date:  2009-05-18       Impact factor: 5.911

Review 4.  Microtubule targeting agents: from biophysics to proteomics.

Authors:  D Calligaris; P Verdier-Pinard; F Devred; C Villard; D Braguer; Daniel Lafitte
Journal:  Cell Mol Life Sci       Date:  2010-01-28       Impact factor: 9.261

Review 5.  MALDI imaging mass spectrometry for direct tissue analysis: technological advancements and recent applications.

Authors:  Benjamin Balluff; Cedrik Schöne; Heinz Höfler; Axel Walch
Journal:  Histochem Cell Biol       Date:  2011-07-30       Impact factor: 4.304

6.  Activity-based probes linked with laser-cleavable mass tags for signal amplification in imaging mass spectrometry: analysis of serine hydrolase enzymes in mammalian tissue.

Authors:  Junhai Yang; Pierre Chaurand; Jeremy L Norris; Ned A Porter; Richard M Caprioli
Journal:  Anal Chem       Date:  2012-03-29       Impact factor: 6.986

7.  Peptide nucleic acid probes with charged photocleavable mass markers: Towards PNA-based MALDI-TOF MS genetic analysis.

Authors:  Rachel J Ball; Philip S Green; Nittaya Gale; G John Langley; Tom Brown
Journal:  Artif DNA PNA XNA       Date:  2010-07

8.  A photocleavable and mass spectrometry identifiable cross-linker for protein interaction studies.

Authors:  Li Yang; Xiaoting Tang; Chad R Weisbrod; Gerhard R Munske; Jimmy K Eng; Priska D von Haller; Nathan K Kaiser; James E Bruce
Journal:  Anal Chem       Date:  2010-05-01       Impact factor: 6.986

Review 9.  MALDI tissue imaging: from biomarker discovery to clinical applications.

Authors:  Lisa H Cazares; Dean A Troyer; Binghe Wang; Richard R Drake; O John Semmes
Journal:  Anal Bioanal Chem       Date:  2011-05-04       Impact factor: 4.142

10.  Effect of MALDI matrices on lipid analyses of biological tissues using MALDI-2 postionization mass spectrometry.

Authors:  Josiah C McMillen; Jarod A Fincher; Dustin R Klein; Jeffrey M Spraggins; Richard M Caprioli
Journal:  J Mass Spectrom       Date:  2020-12       Impact factor: 1.982

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