Literature DB >> 17476459

Molecular phylogeny of horsetails (Equisetum) including chloroplast atpB sequences.

Jean-Michel Guillon1.   

Abstract

Equisetum is a genus of 15 extant species that are the sole surviving representatives of the class Sphenopsida. The generally accepted taxonomy of Equisetum recognizes two subgenera: Equisetum and Hippochaete. Two recent phylogenetical studies have independently questioned the monophyly of subgenus Equisetum. Here, I use original (atpB) and published (rbcL, trnL-trnF, rps4) sequence data to investigate the phylogeny of the genus. Analyses of atpB sequences give an unusual topology, with E. bogotense branching within Hippochaete. A Bayesian analysis based on all available sequences yields a tree with increased resolution, favoring the sister relationships of E. bogotense with subgenus Hippochaete.

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Year:  2007        PMID: 17476459     DOI: 10.1007/s10265-007-0088-x

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   3.000


  11 in total

1.  Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants.

Authors:  K M Pryer; H Schneider; A R Smith; R Cranfill; P G Wolf; J S Hunt; S D Sipes
Journal:  Nature       Date:  2001-02-01       Impact factor: 49.962

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  How meaningful are Bayesian support values?

Authors:  Mark P Simmons; Kurt M Pickett; Masaki Miya
Journal:  Mol Biol Evol       Date:  2003-10-31       Impact factor: 16.240

4.  Incongruence between primary sequence data and the distribution of a mitochondrial atp1 group II intron among ferns and horsetails.

Authors:  Niklas Wikström; Kathleen M Pryer
Journal:  Mol Phylogenet Evol       Date:  2005-09       Impact factor: 4.286

Review 5.  Vegetative and reproductive innovations of early land plants: implications for a unified phylogeny.

Authors:  K S Renzaglia; D L Nickrent; D J Garbary
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2000-06-29       Impact factor: 6.237

6.  Evaluation of atpB nucleotide sequences for phylogenetic studies of ferns and other pteridophytes.

Authors:  P Wolf
Journal:  Am J Bot       Date:  1997-10       Impact factor: 3.844

7.  Large-scale production of DNA sequencing templates by microtitre format PCR.

Authors:  A Rosenthal; O Coutelle; M Craxton
Journal:  Nucleic Acids Res       Date:  1993-01-11       Impact factor: 16.971

8.  Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants.

Authors:  D L Nickrent; C L Parkinson; J D Palmer; R J Duff
Journal:  Mol Biol Evol       Date:  2000-12       Impact factor: 16.240

9.  Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence.

Authors:  Michael E Alfaro; Stefan Zoller; François Lutzoni
Journal:  Mol Biol Evol       Date:  2003-02       Impact factor: 16.240

10.  Tree ferns: monophyletic groups and their relationships as revealed by four protein-coding plastid loci.

Authors:  Petra Korall; Kathleen M Pryer; Jordan S Metzgar; Harald Schneider; David S Conant
Journal:  Mol Phylogenet Evol       Date:  2006-02-14       Impact factor: 4.286

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  12 in total

1.  An extensin-rich matrix lines the carinal canals in Equisetum ramosissimum, which may function as water-conducting channels.

Authors:  O Leroux; J P Knox; B Masschaele; A Bagniewska-Zadworna; S E Marcus; M Claeys; L van Hoorebeke; R L L Viane
Journal:  Ann Bot       Date:  2011-07-12       Impact factor: 4.357

2.  Horsetails Are Ancient Polyploids: Evidence from Equisetum giganteum.

Authors:  Kevin Vanneste; Lieven Sterck; Alexander Andrew Myburg; Yves Van de Peer; Eshchar Mizrachi
Journal:  Plant Cell       Date:  2015-05-22       Impact factor: 11.277

3.  Evolution of mixed-linkage (1 -> 3, 1 -> 4)-β-D-glucan (MLG) and xyloglucan in Equisetum (horsetails) and other monilophytes.

Authors:  Xinxin Xue; Stephen C Fry
Journal:  Ann Bot       Date:  2012-02-28       Impact factor: 4.357

4.  The remarkable stomata of horsetails (Equisetum): patterning, ultrastructure and development.

Authors:  Erin Cullen; Paula J Rudall
Journal:  Ann Bot       Date:  2016-06-06       Impact factor: 4.357

5.  DNA barcoding the Canadian Arctic flora: core plastid barcodes (rbcL + matK) for 490 vascular plant species.

Authors:  Jeffery M Saarela; Paul C Sokoloff; Lynn J Gillespie; Laurie L Consaul; Roger D Bull
Journal:  PLoS One       Date:  2013-10-22       Impact factor: 3.240

6.  Biogeography and genome size evolution of the oldest extant vascular plant genus, Equisetum (Equisetaceae).

Authors:  Maarten J M Christenhusz; Mark W Chase; Michael F Fay; Oriane Hidalgo; Ilia J Leitch; Jaume Pellicer; Juan Viruel
Journal:  Ann Bot       Date:  2021-04-17       Impact factor: 4.357

7.  Equisetum species show uniform epicuticular wax structures but diverse composition patterns.

Authors:  Thomas Brune; Klaus Haas
Journal:  AoB Plants       Date:  2011-03-24       Impact factor: 3.276

8.  Identification of common horsetail (Equisetum arvense L.; Equisetaceae) using Thin Layer Chromatography versus DNA barcoding.

Authors:  C Haris Saslis-Lagoudakis; Sam Bruun-Lund; Natalie E Iwanycki; Ole Seberg; Gitte Petersen; Anna K Jäger; Nina Rønsted
Journal:  Sci Rep       Date:  2015-07-13       Impact factor: 4.379

9.  Cytological and proteomic analyses of horsetail (Equisetum arvense L.) spore germination.

Authors:  Qi Zhao; Jing Gao; Jinwei Suo; Sixue Chen; Tai Wang; Shaojun Dai
Journal:  Front Plant Sci       Date:  2015-06-17       Impact factor: 5.753

10.  Complete plastid genomes from Ophioglossum californicum, Psilotum nudum, and Equisetum hyemale reveal an ancestral land plant genome structure and resolve the position of Equisetales among monilophytes.

Authors:  Felix Grewe; Wenhu Guo; Emily A Gubbels; A Katie Hansen; Jeffrey P Mower
Journal:  BMC Evol Biol       Date:  2013-01-11       Impact factor: 3.260

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