Literature DB >> 17469855

Probing the iron-substrate orientation for taurine/alpha-ketoglutarate dioxygenase using deuterium electron spin echo envelope modulation spectroscopy.

Rajendra Bose Muthukumaran1, Piotr K Grzyska, Robert P Hausinger, John McCracken.   

Abstract

The structural relationship between substrate taurine and the non-heme Fe(II) center of taurine/alpha-ketoglutarate (alphaKG) dioxygenase (TauD) was measured using electron spin echo envelope modulation (ESEEM) spectroscopy. Studies were conducted on TauD samples treated with NO, cosubstrate alphaKG, and either protonated or specifically deuterated taurine. Stimulated echo ESEEM data were divided to eliminate interference from 1H and 14N modulations and accentuate modulations from 2H. For taurine that was deuterated at the C1 position (adjacent to the sulfonate group), 2H ESEEM spectra show features that arise from dipole-dipole and deuterium nuclear quadrupole interactions from a single deuteron. Parallel measurements taken for taurine deuterated at both C1 and C2 show an additional ESEEM feature at the deuterium Larmor frequency. Analysis of these data at field positions ranging from g = 4 to g = 2 have allowed us to define the orientation of substrate taurine with respect to the magnetic axes of the Fe(II)-NO, S = 3/2, paramagnetic center. These results are discussed in terms of previous X-ray crystallographic studies and the proposed catalytic mechanism for this family of enzymes.

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Year:  2007        PMID: 17469855     DOI: 10.1021/bi700562t

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of α-Heteroatom Assistance.

Authors:  Noah P Dunham; Wei-Chen Chang; Andrew J Mitchell; Ryan J Martinie; Bo Zhang; Jonathan A Bergman; Lauren J Rajakovich; Bo Wang; Alexey Silakov; Carsten Krebs; Amie K Boal; J Martin Bollinger
Journal:  J Am Chem Soc       Date:  2018-06-04       Impact factor: 15.419

2.  Modular behavior of tauD provides insight into the origin of specificity in alpha-ketoglutarate-dependent nonheme iron oxygenases.

Authors:  Kevin P McCusker; Judith P Klinman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-05       Impact factor: 11.205

3.  Evidence that oxidative dephosphorylation by the nonheme Fe(II), α-ketoglutarate:UMP oxygenase occurs by stereospecific hydroxylation.

Authors:  Anwesha Goswami; Xiaodong Liu; Wenlong Cai; Thomas P Wyche; Tim S Bugni; Maïa Meurillon; Suzanne Peyrottes; Christian Perigaud; Koichi Nonaka; Jürgen Rohr; Steven G Van Lanen
Journal:  FEBS Lett       Date:  2017-01-25       Impact factor: 4.124

4.  Global stability of an α-ketoglutarate-dependent dioxygenase (TauD) and its related complexes.

Authors:  Kate L Henderson; Mingjie Li; Salette Martinez; Edwin A Lewis; Robert P Hausinger; Joseph P Emerson
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-02-15       Impact factor: 3.770

5.  Increased Turnover at Limiting O2 Concentrations by the Thr(387) → Ala Variant of HIF-Prolyl Hydroxylase PHD2.

Authors:  Serap Pektas; Cornelius Y Taabazuing; Michael J Knapp
Journal:  Biochemistry       Date:  2015-04-28       Impact factor: 3.162

6.  Cryoreduction of the NO-adduct of taurine:alpha-ketoglutarate dioxygenase (TauD) yields an elusive {FeNO}(8) species.

Authors:  Shengfa Ye; John C Price; Eric W Barr; Michael T Green; J Martin Bollinger; Carsten Krebs; Frank Neese
Journal:  J Am Chem Soc       Date:  2010-04-07       Impact factor: 15.419

7.  Why Nature Uses Radical SAM Enzymes so Widely: Electron Nuclear Double Resonance Studies of Lysine 2,3-Aminomutase Show the 5'-dAdo• "Free Radical" Is Never Free.

Authors:  Masaki Horitani; Amanda S Byer; Krista A Shisler; Tilak Chandra; Joan B Broderick; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2015-05-19       Impact factor: 15.419

8.  Alternative Reactivity of Leucine 5-Hydroxylase Using an Olefin-Containing Substrate to Construct a Substituted Piperidine Ring.

Authors:  Lide Cha; Sergey Milikisiyants; Madison Davidson; Shan Xue; Tatyana Smirnova; Alex Smirnov; Yisong Guo; Wei-Chen Chang
Journal:  Biochemistry       Date:  2020-05-18       Impact factor: 3.162

9.  Insight into the mechanism of an iron dioxygenase by resolution of steps following the FeIV=HO species.

Authors:  Piotr K Grzyska; Evan H Appelman; Robert P Hausinger; Denis A Proshlyakov
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-10       Impact factor: 11.205

10.  Substrate Promotes Productive Gas Binding in the α-Ketoglutarate-Dependent Oxygenase FIH.

Authors:  Cornelius Y Taabazuing; Justin Fermann; Scott Garman; Michael J Knapp
Journal:  Biochemistry       Date:  2016-01-05       Impact factor: 3.162

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