Literature DB >> 17468272

Alteration of soil rhizosphere communities following genetic transformation of white spruce.

Philippe M LeBlanc1, Richard C Hamelin, Martin Filion.   

Abstract

The application of plant genetic manipulations to agriculture and forestry with the aim of alleviating insect damage through Bacillus thuringiensis transformation could lead to a significant reduction in the release of pesticides into the environment. However, many groups have come forward with very valid and important questions related to potentially adverse effects, and it is crucial to assess and better understand the impact that this technology might have on ecosystems. In this study, we analyzed rhizosphere soil samples collected from the first B. thuringiensis-transformed trees [with insertion of the CryIA(b) toxin-encoding gene] grown in Canada (Val-Cartier, QC, Canada) as part of an ecological impact assessment project. Using a robust amplified rRNA gene restriction analysis approach coupled with 16S rRNA gene sequencing, the rhizosphere-inhabiting microbial communities of white spruce (Picea glauca) genetically modified by biolistic insertion of the cryIA(b), uidA (beta-glucuronidase), and nptII genes were compared with the microbial communities associated with non-genetically modified counterparts and with trees in which only the genetic marker genes uidA and nptII have been inserted. Analysis of 1,728 rhizosphere bacterial clones (576 clones per treatment) using a Cramér-von Mises statistic analysis combined with a Monte Carlo comparison clearly indicated that there was a statistically significant difference (P < 0.05) between the microbial communities inhabiting the rhizospheres of trees carrying the cryIA(b), uidA, and nptII transgenes, trees carrying only the uidA and nptII transgenes, and control trees. Clear rhizosphere microbial community alterations due to B. thuringiensis tree genetic modification have to our knowledge never been described previously and open the door to interesting questions related to B. thuringiensis genetic transformation and also to the impact of commonly used uidA and nptII genetic marker genes.

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Year:  2007        PMID: 17468272      PMCID: PMC1932765          DOI: 10.1128/AEM.02590-06

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  25 in total

1.  Use of the T-RFLP technique to assess spatial and temporal changes in the bacterial community structure within an agricultural soil planted with transgenic and non-transgenic potato plants.

Authors: 
Journal:  FEMS Microbiol Ecol       Date:  2000-06-01       Impact factor: 4.194

Review 2.  Impact of genetically modified crops on soil- and plant-associated microbial communities.

Authors:  Kari E Dunfield; James J Germida
Journal:  J Environ Qual       Date:  2004 May-Jun       Impact factor: 2.751

3.  Effect of Cry3Bb transgenic corn and tefluthrin on the soil microbial community: biomass, activity, and diversity.

Authors:  M H Devare; C M Jones; J E Thies
Journal:  J Environ Qual       Date:  2004 May-Jun       Impact factor: 2.751

4.  Integration of microbial ecology and statistics: a test to compare gene libraries.

Authors:  Patrick D Schloss; Bret R Larget; Jo Handelsman
Journal:  Appl Environ Microbiol       Date:  2004-09       Impact factor: 4.792

5.  Degradation of the Cry1Ab protein within transgenic Bacillus thuringiensis corn tissue in the field.

Authors:  C Zwahlen; A Hilbeck; P Gugerli; W Nentwig
Journal:  Mol Ecol       Date:  2003-03       Impact factor: 6.185

6.  Establishment of introduced antagonistic bacteria in the rhizosphere of transgenic potatoes and their effect on the bacterial community.

Authors:  Jana Lottmann; Holger Heuer; Johann De Vries; Andreas Mahn; Klaus Düring; Wilfried Wackernagel; Kornelia Smalla; Gabriele Berg
Journal:  FEMS Microbiol Ecol       Date:  2000-07-01       Impact factor: 4.194

7.  Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis.

Authors:  U Nübel; B Engelen; A Felske; J Snaidr; A Wieshuber; R I Amann; W Ludwig; H Backhaus
Journal:  J Bacteriol       Date:  1996-10       Impact factor: 3.490

8.  Molecular profiling of rhizosphere microbial communities associated with healthy and diseased black spruce (Picea mariana) seedlings grown in a nursery.

Authors:  M Filion; R C Hamelin; L Bernier; M St-Arnaud
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

9.  Spread of recombinant DNA by roots and pollen of transgenic potato plants, identified by highly specific biomonitoring using natural transformation of an Acinetobacter sp.

Authors:  Johann de Vries; Martin Heine; Klaus Harms; Wilfried Wackernagel
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

10.  The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis.

Authors:  J R Cole; B Chai; R J Farris; Q Wang; S A Kulam; D M McGarrell; G M Garrity; J M Tiedje
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

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  6 in total

1.  A case study for assessment of microbial community dynamics in genetically modified Bt cotton crop fields.

Authors:  Manisha Kapur; Ranjana Bhatia; Gunjan Pandey; Janmejay Pandey; Debarati Paul; Rakesh K Jain
Journal:  Curr Microbiol       Date:  2010-01-23       Impact factor: 2.188

2.  Effect of soil clay content on RNA isolation and on detection and quantification of bacterial gene transcripts in soil by quantitative reverse transcription-PCR.

Authors:  A Novinscak; M Filion
Journal:  Appl Environ Microbiol       Date:  2011-07-01       Impact factor: 4.792

3.  Effect of genetically modified poplars on soil microbial communities during the phytoremediation of waste mine tailings.

Authors:  Moonsuk Hur; Yongho Kim; Hae-Ryong Song; Jong Min Kim; Young Im Choi; Hana Yi
Journal:  Appl Environ Microbiol       Date:  2011-09-02       Impact factor: 4.792

4.  Temporal dynamics of bacterial and fungal communities in a genetically modified (GM) rice ecosystem.

Authors:  Seung-Hoon Lee; Chang-Gi Kim; Hojeong Kang
Journal:  Microb Ecol       Date:  2010-12-03       Impact factor: 4.552

Review 5.  Do transgenic plants affect rhizobacteria populations?

Authors:  Martin Filion
Journal:  Microb Biotechnol       Date:  2008-08-04       Impact factor: 5.813

6.  The effects of high-tannin leaf litter from transgenic poplars on microbial communities in microcosm soils.

Authors:  Richard S Winder; Josyanne Lamarche; C Peter Constabel; Richard C Hamelin
Journal:  Front Microbiol       Date:  2013-09-26       Impact factor: 5.640

  6 in total

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