Literature DB >> 17452639

An information-theoretic framework for resolving community structure in complex networks.

Martin Rosvall1, Carl T Bergstrom.   

Abstract

To understand the structure of a large-scale biological, social, or technological network, it can be helpful to decompose the network into smaller subunits or modules. In this article, we develop an information-theoretic foundation for the concept of modularity in networks. We identify the modules of which the network is composed by finding an optimal compression of its topology, capitalizing on regularities in its structure. We explain the advantages of this approach and illustrate them by partitioning a number of real-world and model networks.

Mesh:

Year:  2007        PMID: 17452639      PMCID: PMC1855072          DOI: 10.1073/pnas.0611034104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

Review 1.  Community structure in social and biological networks.

Authors:  M Girvan; M E J Newman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

2.  Modularity and extreme edges of the internet.

Authors:  Kasper Astrup Eriksen; Ingve Simonsen; Sergei Maslov; Kim Sneppen
Journal:  Phys Rev Lett       Date:  2003-04-11       Impact factor: 9.161

3.  Fast algorithm for detecting community structure in networks.

Authors:  M E J Newman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-06-18

4.  Finding and evaluating community structure in networks.

Authors:  M E J Newman; M Girvan
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-02-26

5.  Defining and identifying communities in networks.

Authors:  Filippo Radicchi; Claudio Castellano; Federico Cecconi; Vittorio Loreto; Domenico Parisi
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-23       Impact factor: 11.205

6.  Functional cartography of complex metabolic networks.

Authors:  Roger Guimerà; Luís A Nunes Amaral
Journal:  Nature       Date:  2005-02-24       Impact factor: 49.962

7.  Uncovering the overlapping community structure of complex networks in nature and society.

Authors:  Gergely Palla; Imre Derényi; Illés Farkas; Tamás Vicsek
Journal:  Nature       Date:  2005-06-09       Impact factor: 49.962

8.  Information-theoretic approach to network modularity.

Authors:  Etay Ziv; Manuel Middendorf; Chris H Wiggins
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-04-14

9.  Statistical mechanics of community detection.

Authors:  Jörg Reichardt; Stefan Bornholdt
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-07-18

10.  Finding community structure in networks using the eigenvectors of matrices.

Authors:  M E J Newman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-09-11
View more
  74 in total

1.  The modularity of pollination networks.

Authors:  Jens M Olesen; Jordi Bascompte; Yoko L Dupont; Pedro Jordano
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-04       Impact factor: 11.205

Review 2.  Maps of random walks on complex networks reveal community structure.

Authors:  Martin Rosvall; Carl T Bergstrom
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-23       Impact factor: 11.205

3.  Science beyond impact factors.

Authors:  Peter W Swaan
Journal:  Pharm Res       Date:  2009-02-18       Impact factor: 4.200

4.  Model validation of simple-graph representations of metabolism.

Authors:  Petter Holme
Journal:  J R Soc Interface       Date:  2009-01-20       Impact factor: 4.118

5.  Multi-objective community detection based on memetic algorithm.

Authors:  Peng Wu; Li Pan
Journal:  PLoS One       Date:  2015-05-01       Impact factor: 3.240

6.  A nonparametric view of network models and Newman-Girvan and other modularities.

Authors:  Peter J Bickel; Aiyou Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-23       Impact factor: 11.205

7.  Maximal entropy inference of oncogenicity from phosphorylation signaling.

Authors:  T G Graeber; J R Heath; B J Skaggs; M E Phelps; F Remacle; R D Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-11       Impact factor: 11.205

8.  Functional network community detection can disaggregate and filter multiple underlying pathways in enrichment analyses.

Authors:  Lia X Harrington; Gregory P Way; Jennifer A Doherty; Casey S Greene
Journal:  Pac Symp Biocomput       Date:  2018

9.  Bayesian Community Detection in the Space of Group-Level Functional Differences.

Authors:  Archana Venkataraman; Daniel Y-J Yang; Kevin A Pelphrey; James S Duncan
Journal:  IEEE Trans Med Imaging       Date:  2016-03-02       Impact factor: 10.048

Review 10.  The structure and dynamics of multilayer networks.

Authors:  S Boccaletti; G Bianconi; R Criado; C I Del Genio; J Gómez-Gardeñes; M Romance; I Sendiña-Nadal; Z Wang; M Zanin
Journal:  Phys Rep       Date:  2014-07-10       Impact factor: 25.600

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.