Literature DB >> 16907154

Statistical mechanics of community detection.

Jörg Reichardt1, Stefan Bornholdt.   

Abstract

Starting from a general ansatz, we show how community detection can be interpreted as finding the ground state of an infinite range spin glass. Our approach applies to weighted and directed networks alike. It contains the ad hoc introduced quality function from [J. Reichardt and S. Bornholdt, Phys. Rev. Lett. 93, 218701 (2004)] and the modularity Q as defined by Newman and Girvan [Phys. Rev. E 69, 026113 (2004)] as special cases. The community structure of the network is interpreted as the spin configuration that minimizes the energy of the spin glass with the spin states being the community indices. We elucidate the properties of the ground state configuration to give a concise definition of communities as cohesive subgroups in networks that is adaptive to the specific class of network under study. Further, we show how hierarchies and overlap in the community structure can be detected. Computationally efficient local update rules for optimization procedures to find the ground state are given. We show how the ansatz may be used to discover the community around a given node without detecting all communities in the full network and we give benchmarks for the performance of this extension. Finally, we give expectation values for the modularity of random graphs, which can be used in the assessment of statistical significance of community structure.

Year:  2006        PMID: 16907154     DOI: 10.1103/PhysRevE.74.016110

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  259 in total

1.  Modularity-based graph partitioning using conditional expected models.

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-01-12

2.  Detecting hidden spatial and spatio-temporal structures in glasses and complex physical systems by multiresolution network clustering.

Authors:  P Ronhovde; S Chakrabarty; D Hu; M Sahu; K K Sahu; K F Kelton; N A Mauro; Z Nussinov
Journal:  Eur Phys J E Soft Matter       Date:  2011-09-29       Impact factor: 1.890

3.  Stability of graph communities across time scales.

Authors:  J-C Delvenne; S N Yaliraki; M Barahona
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-30       Impact factor: 11.205

4.  Resolution limit in community detection.

Authors:  Santo Fortunato; Marc Barthélemy
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-26       Impact factor: 11.205

5.  An information-theoretic framework for resolving community structure in complex networks.

Authors:  Martin Rosvall; Carl T Bergstrom
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-23       Impact factor: 11.205

6.  Module identification in bipartite and directed networks.

Authors:  Roger Guimerà; Marta Sales-Pardo; Luís A Nunes Amaral
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-09-06

7.  Spontaneous emergence of modularity in cellular networks.

Authors:  Ricard V Solé; Sergi Valverde
Journal:  J R Soc Interface       Date:  2008-01-06       Impact factor: 4.118

8.  Taxonomies of networks from community structure.

Authors:  Jukka-Pekka Onnela; Daniel J Fenn; Stephen Reid; Mason A Porter; Peter J Mucha; Mark D Fricker; Nick S Jones
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-09-10

9.  Network analysis of persistent complex bereavement disorder in conjugally bereaved adults.

Authors:  Donald J Robinaugh; Nicole J LeBlanc; Heidi A Vuletich; Richard J McNally
Journal:  J Abnorm Psychol       Date:  2014-06-16

10.  A Guide for Choosing Community Detection Algorithms in Social Network Studies: The Question Alignment Approach.

Authors:  Natalie R Smith; Paul N Zivich; Leah M Frerichs; James Moody; Allison E Aiello
Journal:  Am J Prev Med       Date:  2020-10       Impact factor: 5.043

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