Literature DB >> 17449678

A comprehensive calorimetric investigation of an entropically driven T cell receptor-peptide/major histocompatibility complex interaction.

Kathryn M Armstrong1, Brian M Baker.   

Abstract

The alphabeta T cell receptor (TCR) is responsible for recognizing peptides bound and "presented" by major histocompatibility complex (MHC) molecules. We recently reported that at 25 degrees C the A6 TCR, which recognizes the Tax peptide presented by the class I MHC human leukocyte antigen-A*0201 (HLA-A2), binds with a weak DeltaH degrees , a favorable DeltaS degrees , and a moderately negative DeltaC(p). These observations were of interest given the unfavorable binding entropies and large heat capacity changes measured for many other TCR-ligand interactions, suggested to result from TCR conformational changes occurring upon binding. Here, we further investigated the A6-Tax/HLA-A2 interaction using titration calorimetry. We found that binding results in a pK(a) shift, complicating interpretation of measured binding thermodynamics. To better characterize the interaction, we measured binding as a function of pH, temperature, and buffer ionization enthalpy. A global analysis of the resulting data allowed determination of both the intrinsic binding thermodynamics separated from the influence of protonation as well as the thermodynamics associated with the pK(a) shift. Our results indicate that intrinsically, A6 binds Tax/HLA-A2 with a very weak DeltaH degrees , an even more favorable DeltaS degrees than previously thought, and a relatively large negative DeltaC(p). Comparison of these energetics with the makeup of the protein-protein interface suggests that conformational adjustments are required for binding, but these are more likely to be structural shifts, rather than disorder-to-order transitions. The thermodynamics of the pK(a) shift suggest protonation may be linked to an additional process such as ion binding.

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Year:  2007        PMID: 17449678      PMCID: PMC1896243          DOI: 10.1529/biophysj.107.104570

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  58 in total

1.  Van't Hoff and calorimetric enthalpies from isothermal titration calorimetry: are there significant discrepancies?

Authors:  J R Horn; D Russell; E A Lewis; K P Murphy
Journal:  Biochemistry       Date:  2001-02-13       Impact factor: 3.162

2.  Four A6-TCR/peptide/HLA-A2 structures that generate very different T cell signals are nearly identical.

Authors:  Y H Ding; B M Baker; D N Garboczi; W E Biddison; D C Wiley
Journal:  Immunity       Date:  1999-07       Impact factor: 31.745

3.  A T cell receptor CDR3beta loop undergoes conformational changes of unprecedented magnitude upon binding to a peptide/MHC class I complex.

Authors:  Jean Baptiste Reiser; Claude Grégoire; Claudine Darnault; Thomas Mosser; Annick Guimezanes; Anne Marie Schmitt-Verhulst; Juan Carlos Fontecilla-Camps; Gilbert Mazza; Bernard Malissen; Dominique Housset
Journal:  Immunity       Date:  2002-03       Impact factor: 31.745

4.  A structural basis for the selection of dominant alphabeta T cell receptors in antiviral immunity.

Authors:  Lars Kjer-Nielsen; Craig S Clements; Anthony W Purcell; Andrew G Brooks; James C Whisstock; Scott R Burrows; James McCluskey; Jamie Rossjohn
Journal:  Immunity       Date:  2003-01       Impact factor: 31.745

5.  Structure and energetics of protein-protein interactions: the role of conformational heterogeneity in OMTKY3 binding to serine proteases.

Authors:  James R Horn; S Ramaswamy; Kenneth P Murphy
Journal:  J Mol Biol       Date:  2003-08-08       Impact factor: 5.469

Review 6.  T cell receptors: affinities, cross-reactivities, and a conformer model.

Authors:  Phillip D Holler; David M Kranz
Journal:  Mol Immunol       Date:  2004-02       Impact factor: 4.407

7.  Evaluation of linked protonation effects in protein binding reactions using isothermal titration calorimetry.

Authors:  B M Baker; K P Murphy
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

8.  Structural basis of plasticity in T cell receptor recognition of a self peptide-MHC antigen.

Authors:  K C Garcia; M Degano; L R Pease; M Huang; P A Peterson; L Teyton; I A Wilson
Journal:  Science       Date:  1998-02-20       Impact factor: 47.728

9.  HLA-A2-peptide complexes: refolding and crystallization of molecules expressed in Escherichia coli and complexed with single antigenic peptides.

Authors:  D N Garboczi; D T Hung; D C Wiley
Journal:  Proc Natl Acad Sci U S A       Date:  1992-04-15       Impact factor: 11.205

10.  Direct comparison of binding equilibrium, thermodynamic, and rate constants determined by surface- and solution-based biophysical methods.

Authors:  Yasmina S N Day; Cheryl L Baird; Rebecca L Rich; David G Myszka
Journal:  Protein Sci       Date:  2002-05       Impact factor: 6.725

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  26 in total

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Authors:  Nathan P Coussens; Peter Schuck; Huaying Zhao
Journal:  J Chem Thermodyn       Date:  2012-09-01       Impact factor: 3.178

2.  Protein-protein interaction investigated by steered molecular dynamics: the TCR-pMHC complex.

Authors:  Michel A Cuendet; Olivier Michielin
Journal:  Biophys J       Date:  2008-07-11       Impact factor: 4.033

3.  Disparate degrees of hypervariable loop flexibility control T-cell receptor cross-reactivity, specificity, and binding mechanism.

Authors:  Daniel R Scott; Oleg Y Borbulevych; Kurt H Piepenbrink; Steven A Corcelli; Brian M Baker
Journal:  J Mol Biol       Date:  2011-10-12       Impact factor: 5.469

4.  Integration and global analysis of isothermal titration calorimetry data for studying macromolecular interactions.

Authors:  Chad A Brautigam; Huaying Zhao; Carolyn Vargas; Sandro Keller; Peter Schuck
Journal:  Nat Protoc       Date:  2016-04-07       Impact factor: 13.491

5.  Methods for quantifying T cell receptor binding affinities and thermodynamics.

Authors:  Kurt H Piepenbrink; Brian E Gloor; Kathryn M Armstrong; Brian M Baker
Journal:  Methods Enzymol       Date:  2009-11-13       Impact factor: 1.600

Review 6.  Global ITC fitting methods in studies of protein allostery.

Authors:  Lee Freiburger; Karine Auclair; Anthony Mittermaier
Journal:  Methods       Date:  2015-01-05       Impact factor: 3.608

7.  Van't Hoff global analyses of variable temperature isothermal titration calorimetry data.

Authors:  Lee A Freiburger; Karine Auclair; Anthony K Mittermaier
Journal:  Thermochim Acta       Date:  2012-01-10       Impact factor: 3.115

8.  ITC for Characterization of Self-Assembly Process of Cationic Dendrons for siRNA Delivery.

Authors:  Erik Laurini; Suzana Aulic; Natasa Skoko; Domenico Marson; Maurizio Fermeglia; Sabrina Pricl
Journal:  Methods Mol Biol       Date:  2021

9.  The C terminus of the bacterial multidrug transporter EmrE couples drug binding to proton release.

Authors:  Nathan E Thomas; Chao Wu; Emma A Morrison; Anne E Robinson; Josephine P Werner; Katherine A Henzler-Wildman
Journal:  J Biol Chem       Date:  2018-10-04       Impact factor: 5.157

10.  Fluorine substitutions in an antigenic peptide selectively modulate T-cell receptor binding in a minimally perturbing manner.

Authors:  Kurt H Piepenbrink; Oleg Y Borbulevych; Ruth F Sommese; John Clemens; Kathryn M Armstrong; Clare Desmond; Priscilla Do; Brian M Baker
Journal:  Biochem J       Date:  2009-10-12       Impact factor: 3.857

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