Literature DB >> 11327839

Van't Hoff and calorimetric enthalpies from isothermal titration calorimetry: are there significant discrepancies?

J R Horn1, D Russell, E A Lewis, K P Murphy.   

Abstract

The enthalpy of a reaction is most often determined through one of two means; it can be determined directly using calorimetry or indirectly by measuring the temperature dependence of the equilibrium constant (i.e., the van't Hoff method). Recently, discrepancies have been noted between the enthalpy measured by calorimetry, and the enthalpy determined by the van't Hoff method,. This has been suggested to indicate that the binding reaction is more complex than the simple one-to-one binding model used to describe the data. To better understand possible discrepancies between and, we have undertaken both experimental studies using isothermal titration calorimetry to measure the binding energetics of Ba(2+) binding 18-crown-6 ether and 2'-CMP binding RNase A, along with a simulation of a system involving a molecule in conformational equilibrium coupled with binding. We find that when experimental setup and analysis are correctly performed, no statistically significant discrepancies between and exist even for the linked system.

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Year:  2001        PMID: 11327839     DOI: 10.1021/bi002408e

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  38 in total

1.  Heat capacity changes in RNA folding: application of perturbation theory to hammerhead ribozyme cold denaturation.

Authors:  Peter J Mikulecky; Andrew L Feig
Journal:  Nucleic Acids Res       Date:  2004-07-28       Impact factor: 16.971

2.  Systematic mutation and thermodynamic analysis of central tyrosine pairs in polyspecific NKG2D receptor interactions.

Authors:  David J Culpepper; Michael K Maddox; Andrew B Caldwell; Benjamin J McFarland
Journal:  Mol Immunol       Date:  2010-11-12       Impact factor: 4.407

Review 3.  Thermodynamics of protein-ligand interactions as a reference for computational analysis: how to assess accuracy, reliability and relevance of experimental data.

Authors:  Stefan G Krimmer; Gerhard Klebe
Journal:  J Comput Aided Mol Des       Date:  2015-09-16       Impact factor: 3.686

4.  Binding-linked protonation of a DNA minor-groove agent.

Authors:  Binh Nguyen; Jaroslav Stanek; W David Wilson
Journal:  Biophys J       Date:  2005-11-18       Impact factor: 4.033

Review 5.  Heat capacity changes associated with nucleic acid folding.

Authors:  Peter J Mikulecky; Andrew L Feig
Journal:  Biopolymers       Date:  2006-05       Impact factor: 2.505

6.  MalE of group A Streptococcus participates in the rapid transport of maltotriose and longer maltodextrins.

Authors:  Samuel A Shelburne; Han Fang; Nnaja Okorafor; Paul Sumby; Izabela Sitkiewicz; David Keith; Payal Patel; Celest Austin; Edward A Graviss; James M Musser; Dar-Chone Chow
Journal:  J Bacteriol       Date:  2007-01-26       Impact factor: 3.490

7.  A comprehensive calorimetric investigation of an entropically driven T cell receptor-peptide/major histocompatibility complex interaction.

Authors:  Kathryn M Armstrong; Brian M Baker
Journal:  Biophys J       Date:  2007-04-20       Impact factor: 4.033

8.  pytc: Open-Source Python Software for Global Analyses of Isothermal Titration Calorimetry Data.

Authors:  Hiranmayi Duvvuri; Lucas C Wheeler; Michael J Harms
Journal:  Biochemistry       Date:  2018-04-18       Impact factor: 3.162

9.  Enthalpy array analysis of enzymatic and binding reactions.

Authors:  Michael I Recht; Dirk De Bruyker; Alan G Bell; Michal V Wolkin; Eric Peeters; Greg B Anderson; Anand R Kolatkar; Marshall W Bern; Peter Kuhn; Richard H Bruce; Frank E Torres
Journal:  Anal Biochem       Date:  2008-03-07       Impact factor: 3.365

10.  Activation of leukemia-associated RhoGEF by Galpha13 with significant conformational rearrangements in the interface.

Authors:  Nobuchika Suzuki; Kouhei Tsumoto; Nicole Hajicek; Kenji Daigo; Reiko Tokita; Shiro Minami; Tatsuhiko Kodama; Takao Hamakubo; Tohru Kozasa
Journal:  J Biol Chem       Date:  2008-12-12       Impact factor: 5.157

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