Literature DB >> 17401211

Tyrosyl-tRNA synthetase: the first crystallization of a human mitochondrial aminoacyl-tRNA synthetase.

Luc Bonnefond1, Magali Frugier, Elodie Touzé, Bernard Lorber, Catherine Florentz, Richard Giegé, Joëlle Rudinger-Thirion, Claude Sauter.   

Abstract

Human mitochondrial tyrosyl-tRNA synthetase and a truncated version with its C-terminal S4-like domain deleted were purified and crystallized. Only the truncated version, which is active in tyrosine activation and Escherichia coli tRNA(Tyr) charging, yielded crystals suitable for structure determination. These tetragonal crystals, belonging to space group P4(3)2(1)2, were obtained in the presence of PEG 4000 as a crystallizing agent and diffracted X-rays to 2.7 A resolution. Complete data sets could be collected and led to structure solution by molecular replacement.

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Year:  2007        PMID: 17401211      PMCID: PMC2330213          DOI: 10.1107/S1744309107012481

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

1.  Crystallization and preliminary X-ray diffraction study of mammalian mitochondrial seryl-tRNA synthetase.

Authors:  Sarin Chimnaronk; Mads Gravers Jeppesen; Nobukazu Shimada; Tsutomu Suzuki; Jens Nyborg; Kimitsuna Watanabe
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-06-22

2.  A second class of synthetase structure revealed by X-ray analysis of Escherichia coli seryl-tRNA synthetase at 2.5 A.

Authors:  S Cusack; C Berthet-Colominas; M Härtlein; N Nassar; R Leberman
Journal:  Nature       Date:  1990-09-20       Impact factor: 49.962

3.  A tyrosyl-tRNA synthetase adapted to function in group I intron splicing by acquiring a new RNA binding surface.

Authors:  Paul J Paukstelis; Robert Coon; Lakshmi Madabusi; Jacek Nowakowski; Arthur Monzingo; Jon Robertus; Alan M Lambowitz
Journal:  Mol Cell       Date:  2005-02-04       Impact factor: 17.970

4.  Mimivirus TyrRS: preliminary structural and functional characterization of the first amino-acyl tRNA synthetase found in a virus.

Authors:  Chantal Abergel; Sabine Chenivesse; Deborah Byrne; Karsten Suhre; Vincent Arondel; Jean-Michel Claverie
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-01-20

Review 5.  Universal rules and idiosyncratic features in tRNA identity.

Authors:  R Giegé; M Sissler; C Florentz
Journal:  Nucleic Acids Res       Date:  1998-11-15       Impact factor: 16.971

Review 6.  Nuclear genes and mitochondrial translation: a new class of genetic disease.

Authors:  Howard T Jacobs; Douglass M Turnbull
Journal:  Trends Genet       Date:  2005-06       Impact factor: 11.639

7.  Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs.

Authors:  G Eriani; M Delarue; O Poch; J Gangloff; D Moras
Journal:  Nature       Date:  1990-09-13       Impact factor: 49.962

8.  Crystal structure of Staphylococcus aureus tyrosyl-tRNA synthetase in complex with a class of potent and specific inhibitors.

Authors:  X Qiu; C A Janson; W W Smith; S M Green; P McDevitt; K Johanson; P Carter; M Hibbs; C Lewis; A Chalker; A Fosberry; J Lalonde; J Berge; P Brown; C S Houge-Frydrych; R L Jarvest
Journal:  Protein Sci       Date:  2001-10       Impact factor: 6.725

Review 9.  Human mitochondrial tRNAs in health and disease.

Authors:  C Florentz; B Sohm; P Tryoen-Tóth; J Pütz; M Sissler
Journal:  Cell Mol Life Sci       Date:  2003-07       Impact factor: 9.261

10.  Class I tyrosyl-tRNA synthetase has a class II mode of cognate tRNA recognition.

Authors:  Anna Yaremchuk; Ivan Kriklivyi; Michael Tukalo; Stephen Cusack
Journal:  EMBO J       Date:  2002-07-15       Impact factor: 11.598

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  3 in total

1.  Biocrystallography: past, present, future.

Authors:  Richard Giegé; Claude Sauter
Journal:  HFSP J       Date:  2010-04-22

2.  Decreased aminoacylation in pathology-related mutants of mitochondrial tRNATyr is associated with structural perturbations in tRNA architecture.

Authors:  Luc Bonnefond; Catherine Florentz; Richard Giegé; Joëlle Rudinger-Thirion
Journal:  RNA       Date:  2008-02-11       Impact factor: 4.942

3.  Thermodynamic properties distinguish human mitochondrial aspartyl-tRNA synthetase from bacterial homolog with same 3D architecture.

Authors:  Anne Neuenfeldt; Bernard Lorber; Eric Ennifar; Agnès Gaudry; Claude Sauter; Marie Sissler; Catherine Florentz
Journal:  Nucleic Acids Res       Date:  2012-12-28       Impact factor: 16.971

  3 in total

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