Literature DB >> 17381282

The Argonautes.

L Joshua-Tor1.   

Abstract

RNA interference (RNAi) has been greatly exploited in recent years as an increasingly effective tool to study gene function by gene silencing. The introduction of exogenous double-stranded RNA (dsRNA) into a cell can trigger this gene silencing process. An RNase III family enzyme, Dicer, initiates silencing by releasing approximately 20 base duplexes, with 2- nucleotide 3' overhangs called siRNAs. The RNAi pathway also mediates the function of endogenous, noncoding regulatory RNAs called miRNAs. Both miRNAs and siRNAs guide substrate selection by similar if not identical effector complexes called RISCs. These contain single-stranded versions of the small RNA and additional protein components. Of those, the signature element, at the heart of all RISCs, is a member of the Argonaute family of proteins. Our structural and biochemical studies on Argonaute identified this protein as Slicer, the enzyme in RISC that cleaves the mRNA as directed by the siRNA. The role of the Argonautes as Slicers and non-Slicers is discussed.

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Year:  2006        PMID: 17381282     DOI: 10.1101/sqb.2006.71.048

Source DB:  PubMed          Journal:  Cold Spring Harb Symp Quant Biol        ISSN: 0091-7451


  30 in total

Review 1.  Ancestral roles of small RNAs: an Ago-centric perspective.

Authors:  Leemor Joshua-Tor; Gregory J Hannon
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-10-01       Impact factor: 10.005

Review 2.  siRNA and miRNA processing: new functions for Cajal bodies.

Authors:  Olga Pontes; Craig S Pikaard
Journal:  Curr Opin Genet Dev       Date:  2008-03-11       Impact factor: 5.578

Review 3.  Retroviral integrase superfamily: the structural perspective.

Authors:  Marcin Nowotny
Journal:  EMBO Rep       Date:  2009-01-23       Impact factor: 8.807

4.  Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes.

Authors:  Oliver H Tam; Alexei A Aravin; Paula Stein; Angelique Girard; Elizabeth P Murchison; Sihem Cheloufi; Emily Hodges; Martin Anger; Ravi Sachidanandam; Richard M Schultz; Gregory J Hannon
Journal:  Nature       Date:  2008-04-10       Impact factor: 49.962

Review 5.  Epigenetic regulation in plants.

Authors:  Craig S Pikaard; Ortrun Mittelsten Scheid
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-12-01       Impact factor: 10.005

6.  10-million-years AGO: argonaute on chromatin in yeast and human, a conserved mode of action?

Authors:  Annick Harel-Bellan; Maya Ameyar Zazoua; Christophe Rachez; Christian Muchardt; Eric Batsché
Journal:  Transcription       Date:  2013-04-12

7.  Analysis and characterization of the genes encoding the Dicer and Argonaute proteins of Schistosoma japonicum.

Authors:  Rong Luo; Xiangyang Xue; Zhangxun Wang; Jun Sun; Ying Zou; Weiqing Pan
Journal:  Parasit Vectors       Date:  2010-09-17       Impact factor: 3.876

8.  Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements.

Authors:  Kira S Makarova; Yuri I Wolf; John van der Oost; Eugene V Koonin
Journal:  Biol Direct       Date:  2009-08-25       Impact factor: 4.540

9.  Use of bacterially expressed dsRNA to downregulate Entamoeba histolytica gene expression.

Authors:  Carlos F Solis; Julien Santi-Rocca; Doranda Perdomo; Christian Weber; Nancy Guillén
Journal:  PLoS One       Date:  2009-12-23       Impact factor: 3.240

10.  Six RNA viruses and forty-one hosts: viral small RNAs and modulation of small RNA repertoires in vertebrate and invertebrate systems.

Authors:  Poornima Parameswaran; Ella Sklan; Courtney Wilkins; Trever Burgon; Melanie A Samuel; Rui Lu; K Mark Ansel; Vigo Heissmeyer; Shirit Einav; William Jackson; Tammy Doukas; Suman Paranjape; Charlotta Polacek; Flavia Barreto dos Santos; Roxana Jalili; Farbod Babrzadeh; Baback Gharizadeh; Dirk Grimm; Mark Kay; Satoshi Koike; Peter Sarnow; Mostafa Ronaghi; Shou-Wei Ding; Eva Harris; Marie Chow; Michael S Diamond; Karla Kirkegaard; Jeffrey S Glenn; Andrew Z Fire
Journal:  PLoS Pathog       Date:  2010-02-12       Impact factor: 6.823

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