Literature DB >> 17364006

Orientation Determination of Membrane-Disruptive Proteins Using Powder Samples and Rotational Diffusion: A Simple Solid-State NMR Approach.

Mei Hong1, Tim Doherty.   

Abstract

The orientation of membrane proteins undergoing fast uniaxial rotation around the bilayer normal can be determined without macroscopic alignment. We show that the motionally averaged powder spectra exhibit their 0° frequency, [Formula: see text], at the same position as the peak of an aligned sample with the alignment axis parallel to the magnetic field. This equivalence is exploited to determine the orientation of a β-sheet antimicrobial peptide not amenable to macroscopic alignment, using (13)CO and (15)N chemical shifts from powder spectra. This powder sample approach permits orientation determination of naturally membrane-disruptive proteins in diverse environments and under magic-angle spinning.

Entities:  

Year:  2006        PMID: 17364006      PMCID: PMC1826912          DOI: 10.1016/j.cplett.2006.10.067

Source DB:  PubMed          Journal:  Chem Phys Lett        ISSN: 0009-2614            Impact factor:   2.328


  11 in total

Review 1.  Structure determination of membrane proteins by NMR spectroscopy.

Authors:  Stanley J Opella; Francesca M Marassi
Journal:  Chem Rev       Date:  2004-08       Impact factor: 60.622

2.  Brownian motion in biological membranes.

Authors:  P G Saffman; M Delbrück
Journal:  Proc Natl Acad Sci U S A       Date:  1975-08       Impact factor: 11.205

3.  Orientational constraints derived from hydrated powder samples by two-dimensional PISEMA.

Authors:  F Tian; Z Song; T A Cross
Journal:  J Magn Reson       Date:  1998-11       Impact factor: 2.229

Review 4.  Solid-state nuclear magnetic resonance characterization of gramicidin channel structure.

Authors:  T A Cross
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

5.  NMR structural analysis of a membrane protein: bacteriorhodopsin peptide backbone orientation and motion.

Authors:  B A Lewis; G S Harbison; J Herzfeld; R G Griffin
Journal:  Biochemistry       Date:  1985-08-13       Impact factor: 3.162

6.  Investigations of polypeptide rotational diffusion in aligned membranes by 2H and 15N solid-state NMR spectroscopy.

Authors:  Christopher Aisenbrey; Burkhard Bechinger
Journal:  J Am Chem Soc       Date:  2004-12-22       Impact factor: 15.419

7.  Solution structure of protegrin-1, a broad-spectrum antimicrobial peptide from porcine leukocytes.

Authors:  R L Fahrner; T Dieckmann; S S Harwig; R I Lehrer; D Eisenberg; J Feigon
Journal:  Chem Biol       Date:  1996-07

8.  Solid-state NMR investigations of peptide-lipid interaction and orientation of a beta-sheet antimicrobial peptide, protegrin.

Authors:  Satoru Yamaguchi; Teresa Hong; Alan Waring; Robert I Lehrer; Mei Hong
Journal:  Biochemistry       Date:  2002-08-06       Impact factor: 3.162

9.  Solid-state NMR investigation of the selective perturbation of lipid bilayers by the cyclic antimicrobial peptide RTD-1.

Authors:  Jarrod J Buffy; Melissa J McCormick; Sungsool Wi; Alan Waring; Robert I Lehrer; Mei Hong
Journal:  Biochemistry       Date:  2004-08-03       Impact factor: 3.162

10.  Tachyplesin, a class of antimicrobial peptide from the hemocytes of the horseshoe crab (Tachypleus tridentatus). Isolation and chemical structure.

Authors:  T Nakamura; H Furunaka; T Miyata; F Tokunaga; T Muta; S Iwanaga; M Niwa; T Takao; Y Shimonishi
Journal:  J Biol Chem       Date:  1988-11-15       Impact factor: 5.157

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  24 in total

1.  Protein Rotational Dynamics in Aligned Lipid Membranes Probed by Anisotropic T NMR Relaxation.

Authors:  Emmanuel O Awosanya; Alexander A Nevzorov
Journal:  Biophys J       Date:  2018-01-23       Impact factor: 4.033

2.  Oligomeric Structure and Three-Dimensional Fold of the HIV gp41 Membrane-Proximal External Region and Transmembrane Domain in Phospholipid Bilayers.

Authors:  Byungsu Kwon; Myungwoon Lee; Alan J Waring; Mei Hong
Journal:  J Am Chem Soc       Date:  2018-06-22       Impact factor: 15.419

3.  Structure and dynamics of cationic membrane peptides and proteins: insights from solid-state NMR.

Authors:  Mei Hong; Yongchao Su
Journal:  Protein Sci       Date:  2011-03-07       Impact factor: 6.725

4.  Sensitivity enhancement of separated local field experiments: application to membrane proteins.

Authors:  T Gopinath; Raffaello Verardi; Nathaniel J Traaseth; Gianluigi Veglia
Journal:  J Phys Chem B       Date:  2010-04-22       Impact factor: 2.991

5.  The development of solid-state NMR of membrane proteins.

Authors:  Stanley J Opella
Journal:  Biomed Spectrosc Imaging       Date:  2014

6.  Dynamics in the solid-state: perspectives for the investigation of amyloid aggregates, membrane proteins and soluble protein complexes.

Authors:  Rasmus Linser; Riddhiman Sarkar; Alexey Krushelnitzky; Andi Mainz; Bernd Reif
Journal:  J Biomol NMR       Date:  2014-03-05       Impact factor: 2.835

Review 7.  Membrane protein structure and dynamics from NMR spectroscopy.

Authors:  Mei Hong; Yuan Zhang; Fanghao Hu
Journal:  Annu Rev Phys Chem       Date:  2011-11-28       Impact factor: 12.703

8.  Effects of arginine density on the membrane-bound structure of a cationic antimicrobial peptide from solid-state NMR.

Authors:  Ming Tang; Alan J Waring; Mei Hong
Journal:  Biochim Biophys Acta       Date:  2008-11-14

9.  Amantadine-induced conformational and dynamical changes of the influenza M2 transmembrane proton channel.

Authors:  Sarah D Cady; Mei Hong
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-29       Impact factor: 11.205

Review 10.  Structure and mechanism of beta-hairpin antimicrobial peptides in lipid bilayers from solid-state NMR spectroscopy.

Authors:  Ming Tang; Mei Hong
Journal:  Mol Biosyst       Date:  2009-01-27
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