Literature DB >> 17363341

Interplay between DNA polymerases beta and lambda in repair of oxidation DNA damage in chicken DT40 cells.

Keizo Tano1, Jun Nakamura, Kenjiro Asagoshi, Hiroshi Arakawa, Eiichiro Sonoda, Elena K Braithwaite, Rajendra Prasad, Jean-Marie Buerstedde, Shunichi Takeda, Masami Watanabe, Samuel H Wilson.   

Abstract

DNA polymerase lambda (Pol lambda) is a DNA polymerase beta (Pol beta)-like enzyme with both DNA synthetic and 5'-deoxyribose-5'-phosphate lyase domains. Recent biochemical studies implicated Pol lambda as a backup enzyme to Pol beta in the mammalian base excision repair (BER) pathway. To examine the interrelationship between Pol lambda and Pol beta in BER of DNA damage in living cells, we disrupted the genes for both enzymes either singly or in combination in the chicken DT40 cell line and then characterized BER phenotypes. Disruption of the genes for both polymerases caused hypersensitivity to H(2)O(2)-induced cytotoxicity, whereas the effect of disruption of either polymerase alone was only modest. Similarly, BER capacity in cells after H(2)O(2) exposure was lower in Pol beta(-/-)/Pol lambda(-/-) cells than in Pol beta(-/-), wild-type, and Pol lambda(-/-) cells, which were equivalent. These results suggest that these polymerases can complement for one another in counteracting oxidative DNA damage. Similar results were obtained in assays for in vitro BER capacity using cell extracts. With MMS-induced cytotoxicity, there was no significant effect on either survival or BER capacity from Pol lambda gene disruption. A strong hypersensitivity and reduction in BER capacity was observed for Pol beta(-/-)/Pol lambda(-/-) and Pol beta(-/-) cells, suggesting that Pol beta had a dominant role in counteracting alkylation DNA damage in this cell system.

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Year:  2007        PMID: 17363341      PMCID: PMC2080795          DOI: 10.1016/j.dnarep.2007.01.011

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  17 in total

1.  Increased ratio of targeted to random integration after transfection of chicken B cell lines.

Authors:  J M Buerstedde; S Takeda
Journal:  Cell       Date:  1991-10-04       Impact factor: 41.582

2.  Impairment of proliferating cell nuclear antigen-dependent apurinic/apyrimidinic site repair on linear DNA.

Authors:  S Biade; R W Sobol; S H Wilson; Y Matsumoto
Journal:  J Biol Chem       Date:  1998-01-09       Impact factor: 5.157

3.  Reduced X-ray resistance and homologous recombination frequencies in a RAD54-/- mutant of the chicken DT40 cell line.

Authors:  O Bezzubova; A Silbergleit; Y Yamaguchi-Iwai; S Takeda; J M Buerstedde
Journal:  Cell       Date:  1997-04-18       Impact factor: 41.582

4.  Requirement of mammalian DNA polymerase-beta in base-excision repair.

Authors:  R W Sobol; J K Horton; R Kühn; H Gu; R K Singhal; R Prasad; K Rajewsky; S H Wilson
Journal:  Nature       Date:  1996-01-11       Impact factor: 49.962

5.  The Arg280His polymorphism in X-ray repair cross-complementing gene 1 impairs DNA repair ability.

Authors:  Takako Takanami; Jun Nakamura; Yoshiko Kubota; Saburo Horiuchi
Journal:  Mutat Res       Date:  2005-04-04       Impact factor: 2.433

6.  DNA polymerase lambda mediates a back-up base excision repair activity in extracts of mouse embryonic fibroblasts.

Authors:  Elena K Braithwaite; Rajendra Prasad; David D Shock; Esther W Hou; William A Beard; Samuel H Wilson
Journal:  J Biol Chem       Date:  2005-03-03       Impact factor: 5.157

7.  'Knock down' of DNA polymerase beta by RNA interference: recapitulation of null phenotype.

Authors:  Yaroslava Y Polosina; Thomas A Rosenquist; Arthur P Grollman; Holly Miller
Journal:  DNA Repair (Amst)       Date:  2004-11-02

8.  Fanconi anemia FANCG protein in mitigating radiation- and enzyme-induced DNA double-strand breaks by homologous recombination in vertebrate cells.

Authors:  Kazuhiko Yamamoto; Masamichi Ishiai; Nobuko Matsushita; Hiroshi Arakawa; Jane E Lamerdin; Jean-Marie Buerstedde; Mitsune Tanimoto; Mine Harada; Larry H Thompson; Minoru Takata
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

9.  Quantitation of intracellular NAD(P)H can monitor an imbalance of DNA single strand break repair in base excision repair deficient cells in real time.

Authors:  Jun Nakamura; Shoji Asakura; Susan D Hester; Gilbert de Murcia; Keith W Caldecott; James A Swenberg
Journal:  Nucleic Acids Res       Date:  2003-09-01       Impact factor: 16.971

10.  Excision of deoxyribose phosphate residues by DNA polymerase beta during DNA repair.

Authors:  Y Matsumoto; K Kim
Journal:  Science       Date:  1995-08-04       Impact factor: 47.728

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  31 in total

Review 1.  Polymerases in nonhomologous end joining: building a bridge over broken chromosomes.

Authors:  Dale A Ramsden
Journal:  Antioxid Redox Signal       Date:  2010-10-28       Impact factor: 8.401

2.  Catalytic mechanism of human DNA polymerase lambda with Mg2+ and Mn2+ from ab initio quantum mechanical/molecular mechanical studies.

Authors:  G Andrés Cisneros; Lalith Perera; Miguel García-Díaz; Katarzyna Bebenek; Thomas A Kunkel; Lee G Pedersen
Journal:  DNA Repair (Amst)       Date:  2008-08-30

3.  DNA 3'-phosphatase activity is critical for rapid global rates of single-strand break repair following oxidative stress.

Authors:  Claire Breslin; Keith W Caldecott
Journal:  Mol Cell Biol       Date:  2009-06-22       Impact factor: 4.272

4.  Evaluating the effects of bioremediation on genotoxicity of polycyclic aromatic hydrocarbon-contaminated soil using genetically engineered, higher eukaryotic cell lines.

Authors:  Jing Hu; Jun Nakamura; Stephen D Richardson; Michael D Aitken
Journal:  Environ Sci Technol       Date:  2012-04-05       Impact factor: 9.028

5.  Deployment of DNA polymerases beta and lambda in single-nucleotide and multinucleotide pathways of mammalian base excision DNA repair.

Authors:  Upasna Thapar; Bruce Demple
Journal:  DNA Repair (Amst)       Date:  2019-02-04

Review 6.  Nonhomologous end joining: a good solution for bad ends.

Authors:  Crystal A Waters; Natasha T Strande; David W Wyatt; John M Pryor; Dale A Ramsden
Journal:  DNA Repair (Amst)       Date:  2014-03-14

7.  Cells deficient in PARP-1 show an accelerated accumulation of DNA single strand breaks, but not AP sites, over the PARP-1-proficient cells exposed to MMS.

Authors:  Brian F Pachkowski; Keizo Tano; Valeriy Afonin; Rhoderick H Elder; Shunichi Takeda; Masami Watanabe; James A Swenberg; Jun Nakamura
Journal:  Mutat Res       Date:  2009-09-22       Impact factor: 2.433

8.  Estrogen Drives Cellular Transformation and Mutagenesis in Cells Expressing the Breast Cancer-Associated R438W DNA Polymerase Lambda Protein.

Authors:  Antonia A Nemec; Korie B Bush; Jamie B Towle-Weicksel; B Frazier Taylor; Vincent Schulz; Joanne B Weidhaas; David P Tuck; Joann B Sweasy
Journal:  Mol Cancer Res       Date:  2016-09-12       Impact factor: 5.852

9.  DNA polymerases beta and lambda mediate overlapping and independent roles in base excision repair in mouse embryonic fibroblasts.

Authors:  Elena K Braithwaite; Padmini S Kedar; Deborah J Stumpo; Barbara Bertocci; Jonathan H Freedman; Leona D Samson; Samuel H Wilson
Journal:  PLoS One       Date:  2010-08-18       Impact factor: 3.240

10.  Template strand scrunching during DNA gap repair synthesis by human polymerase lambda.

Authors:  Miguel Garcia-Diaz; Katarzyna Bebenek; Andres A Larrea; Jody M Havener; Lalith Perera; Joseph M Krahn; Lars C Pedersen; Dale A Ramsden; Thomas A Kunkel
Journal:  Nat Struct Mol Biol       Date:  2009-08-23       Impact factor: 15.369

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