Literature DB >> 17360467

Restriction of endogenous T cell antigen receptor beta rearrangements to Vbeta14 through selective recombination signal sequence modifications.

Cherry Wu1, Sheila Ranganath, Megan Gleason, Barbara B Woodman, Tiffany M Borjeson, Frederick W Alt, Craig H Bassing.   

Abstract

T cell antigen receptor (TCR)beta V(D)J variable region exon assembly is ordered, with Dbeta to Jbeta rearrangements occurring before joining of Vbetas to a DJbeta complex. Germ-line V(D)J segments are flanked by recombination signal (RS) sequences, which consist of heptamers and nonamers separated by a spacer of 12 (12-RS) or 23 (23-RS) bp. V(D)J recombination is restricted by the 12/23 rule; joining occurs only between gene segments flanked by 12-RSs and 23-RSs. Vbeta segments have 23-RSs and Jbeta segments 12-RSs, which based on the 12/23 rule should allow direct joining. However, Vbeta segments rearrange only to DJbeta complexes and not Jbeta segments, because of restrictions beyond 12/23 (B12/23) that make the Vbeta23-RS incompatible with the Jbeta12-RS. To determine whether direct Vbeta to Jbeta joining occurs if flanking RSs are B12/23 compatible, we generated mice whose lymphocytes contained replacement of the Vbeta1412-RS with the 3'Dbeta112-RS on a TCRbeta allele lacking Dbeta segments (the Jbeta1(M6) allele). Mice heterozygous for the Jbeta1(M6) allele had dramatically increased Vbeta14(+) thymocyte and T cell numbers and decreased numbers of cells expressing other Vbetas. This altered Vbeta repertoire resulted from direct Vbeta14 to Jbeta1 rearrangements on the Jbeta1(M6) allele. Mice harboring lymphocytes homozygous for Jbeta1(M6) allele developed normal thymocyte and T cell numbers with all expressing Vbeta14. Our findings show that selective RS modifications enforce rearrangement of a specific Vbeta gene segment and demonstrate the importance of B12/23 mechanisms for ensuring generation of diverse TCRbeta repertoires.

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Year:  2007        PMID: 17360467      PMCID: PMC1820698          DOI: 10.1073/pnas.0700081104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Biased V beta usage in immature thymocytes is independent of DJ beta proximity and pT alpha pairing.

Authors:  A Wilson; C Maréchal; H R MacDonald
Journal:  J Immunol       Date:  2001-01-01       Impact factor: 5.422

2.  Recombination signal sequences restrict chromosomal V(D)J recombination beyond the 12/23 rule.

Authors:  C H Bassing; F W Alt; M M Hughes; M D'Auteuil; T D Wehrly; B B Woodman; F Gärtner; J M White; L Davidson; B P Sleckman
Journal:  Nature       Date:  2000-06-01       Impact factor: 49.962

3.  Assembly of the RAG1/RAG2 synaptic complex.

Authors:  Cynthia L Mundy; Nadja Patenge; Adam G W Matthews; Marjorie A Oettinger
Journal:  Mol Cell Biol       Date:  2002-01       Impact factor: 4.272

Review 4.  The mechanism and regulation of chromosomal V(D)J recombination.

Authors:  Craig H Bassing; Wojciech Swat; Frederick W Alt
Journal:  Cell       Date:  2002-04       Impact factor: 41.582

5.  Cutting edge: targeting of V beta to D beta rearrangement by RSSs can be mediated by the V(D)J recombinase in the absence of additional lymphoid-specific factors.

Authors:  Robert E Tillman; Andrea L Wooley; Bernard Khor; Tara D Wehrly; Carrie A Little; Barry P Sleckman
Journal:  J Immunol       Date:  2003-01-01       Impact factor: 5.422

6.  Ordered assembly of the V(D)J synaptic complex ensures accurate recombination.

Authors:  Jessica M Jones; Martin Gellert
Journal:  EMBO J       Date:  2002-08-01       Impact factor: 11.598

7.  Single-strand recombination signal sequence nicks in vivo: evidence for a capture model of synapsis.

Authors:  John D Curry; Jamie K Geier; Mark S Schlissel
Journal:  Nat Immunol       Date:  2005-11-13       Impact factor: 25.606

8.  Allele-specific regulation of TCR beta variable gene segment chromatin structure.

Authors:  Annette M Jackson; Michael S Krangel
Journal:  J Immunol       Date:  2005-10-15       Impact factor: 5.422

Review 9.  Turning T-cell receptor beta recombination on and off: more questions than answers.

Authors:  Annette M Jackson; Michael S Krangel
Journal:  Immunol Rev       Date:  2006-02       Impact factor: 12.988

10.  Allelic exclusion of the T cell receptor beta locus requires the SH2 domain-containing leukocyte protein (SLP)-76 adaptor protein.

Authors:  I Aifantis; V I Pivniouk; F Gärtner; J Feinberg; W Swat; F W Alt; H von Boehmer; R S Geha
Journal:  J Exp Med       Date:  1999-10-18       Impact factor: 14.307

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  9 in total

1.  Productive coupling of accessible Vbeta14 segments and DJbeta complexes determines the frequency of Vbeta14 rearrangement.

Authors:  Sheila Ranganath; Andrea C Carpenter; Megan Gleason; Albert C Shaw; Craig H Bassing; Frederick W Alt
Journal:  J Immunol       Date:  2008-02-15       Impact factor: 5.422

2.  The in vivo pattern of binding of RAG1 and RAG2 to antigen receptor loci.

Authors:  Yanhong Ji; Wolfgang Resch; Elizabeth Corbett; Arito Yamane; Rafael Casellas; David G Schatz
Journal:  Cell       Date:  2010-04-15       Impact factor: 41.582

3.  Posttranscriptional silencing of VbetaDJbetaCbeta genes contributes to TCRbeta allelic exclusion in mammalian lymphocytes.

Authors:  Natalie C Steinel; Brenna L Brady; Andrea C Carpenter; Katherine S Yang-Iott; Craig H Bassing
Journal:  J Immunol       Date:  2010-06-18       Impact factor: 5.422

4.  Poor-Quality Vβ Recombination Signal Sequences and the DNA Damage Response ATM Kinase Collaborate to Establish TCRβ Gene Repertoire and Allelic Exclusion.

Authors:  Glendon S Wu; Erica J Culberson; Brittney M Allyn; Craig H Bassing
Journal:  J Immunol       Date:  2022-05-09       Impact factor: 5.426

5.  Assembled DJ beta complexes influence TCR beta chain selection and peripheral V beta repertoire.

Authors:  Andrea C Carpenter; Katherine S Yang-Iott; Linda H Chao; Beth Nuskey; Scott Whitlow; Frederick W Alt; Craig H Bassing
Journal:  J Immunol       Date:  2009-05-01       Impact factor: 5.422

6.  TCR beta feedback signals inhibit the coupling of recombinationally accessible V beta 14 segments with DJ beta complexes.

Authors:  Katherine S Yang-Iott; Andrea C Carpenter; Marta A W Rowh; Natalie Steinel; Brenna L Brady; Konrad Hochedlinger; Rudolf Jaenisch; Craig H Bassing
Journal:  J Immunol       Date:  2009-12-30       Impact factor: 5.422

7.  The beyond 12/23 restriction is imposed at the nicking and pairing steps of DNA cleavage during V(D)J recombination.

Authors:  Anna H Drejer-Teel; Sebastian D Fugmann; David G Schatz
Journal:  Mol Cell Biol       Date:  2007-07-16       Impact factor: 4.272

8.  Analyzing the CDR3 Repertoire with respect to TCR-Beta Chain V-D-J and V-J Rearrangements in Peripheral T Cells using HTS.

Authors:  Long Ma; Liwen Yang; Xiaoyan He; Aihua Peng; Yuehong Li; Teng Zhang; Suhong Sun; Rui Ma; Xinsheng Yao
Journal:  Sci Rep       Date:  2016-07-12       Impact factor: 4.379

9.  Poor quality Vβ recombination signal sequences stochastically enforce TCRβ allelic exclusion.

Authors:  Glendon S Wu; Katherine S Yang-Iott; Morgann A Klink; Katharina E Hayer; Kyutae D Lee; Craig H Bassing
Journal:  J Exp Med       Date:  2020-09-07       Impact factor: 14.307

  9 in total

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