Literature DB >> 17358365

Dielectric relaxation of DNA aqueous solutions.

S Tomić1, S Dolanski Babić, T Vuletić, S Krca, D Ivanković, L Griparić, R Podgornik.   

Abstract

We report on a detailed characterization of complex dielectric response of Na-DNA aqueous solutions by means of low-frequency dielectric spectroscopy (40 Hz-110 MHz). Results reveal two broad relaxation modes of strength 20<Deltaepsilon(LF)<100 and 5<Deltaepsilon(HF)<20, centered at 0.5 kHz<nu(LF)<70 kHz and 0.1 MHz<nu(HF)<15 MHz. The characteristic length scale of the low-frequency (LF) process, 50<L(LF)<750 nm, scales with DNA concentration as c(DNA)(-0.29+/-0.04) and is independent of the ionic strength in the low added salt regime. Conversely, the measured length scale of the LF process does not vary with DNA concentration but depends on the ionic strength of the added salt as I(s)(-1) in the high added salt regime. On the other hand, the characteristic length scale of the high-frequency (HF) process, 3<L(HF)<50 nm, varies with DNA concentration as c(DNA)(-0.5) for intermediate and large DNA concentrations. At low DNA concentrations and in the low added salt limit the characteristic length scale of the HF process scales as c(DNA)(-0.33). We put these results in perspective regarding the integrity of the double stranded form of DNA at low salt conditions as well as regarding the role of different types of counterions in different regimes of dielectric dispersion. We argue that the free DNA counterions are primarily active in the HF relaxation, while the condensed counterions play a role only in the LF relaxation. We also suggest theoretical interpretations for all these length scales in the whole regime of DNA and salt concentrations and discuss their ramifications and limitations.

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Year:  2007        PMID: 17358365     DOI: 10.1103/PhysRevE.75.021905

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  10 in total

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-07-20

3.  Low-frequency collective exchange mode in the dielectric spectrum of salt-free dilute polyelectrolyte solutions.

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5.  Direct measurement of the dielectric polarization properties of DNA.

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8.  Long-range DNA-water interactions.

Authors:  Abhishek K Singh; Chengyuan Wen; Shengfeng Cheng; Nguyen Q Vinh
Journal:  Biophys J       Date:  2021-10-21       Impact factor: 4.033

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10.  Effect of magnesium ions on the structure of DNA thin films: an infrared spectroscopy study.

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Journal:  Nucleic Acids Res       Date:  2016-08-02       Impact factor: 16.971

  10 in total

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