Literature DB >> 23401557

Ultralocalized thermal reactions in subnanoliter droplets-in-air.

Eric Salm1, Carlos Duarte Guevara, Piyush Dak, Brian Ross Dorvel, Bobby Reddy, Muhammad Ashraf Alam, Rashid Bashir.   

Abstract

Miniaturized laboratory-on-chip systems promise rapid, sensitive, and multiplexed detection of biological samples for medical diagnostics, drug discovery, and high-throughput screening. Within miniaturized laboratory-on-chips, static and dynamic droplets of fluids in different immiscible media have been used as individual vessels to perform biochemical reactions and confine the products. Approaches to perform localized heating of these individual subnanoliter droplets can allow for new applications that require parallel, time-, and space-multiplex reactions on a single integrated circuit. Our method positions droplets on an array of individual silicon microwave heaters on chip to precisely control the temperature of droplets-in-air, allowing us to perform biochemical reactions, including DNA melting and detection of single base mismatches. We also demonstrate that ssDNA probe molecules can be placed on heaters in solution, dried, and then rehydrated by ssDNA target molecules in droplets for hybridization and detection. This platform enables many applications in droplets including hybridization of low copy number DNA molecules, lysing of single cells, interrogation of ligand-receptor interactions, and rapid temperature cycling for amplification of DNA molecules.

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Year:  2013        PMID: 23401557      PMCID: PMC3587226          DOI: 10.1073/pnas.1219639110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

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Authors:  H Nagai; Y Murakami; K Yokoyama; E Tamiya
Journal:  Biosens Bioelectron       Date:  2001-12       Impact factor: 10.618

Review 2.  Reactions in droplets in microfluidic channels.

Authors:  Helen Song; Delai L Chen; Rustem F Ismagilov
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Review 3.  High-resolution DNA melting analysis for simple and efficient molecular diagnostics.

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Journal:  Pharmacogenomics       Date:  2007-06       Impact factor: 2.533

4.  Selective surface functionalization of silicon nanowires via nanoscale joule heating.

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Journal:  Nano Lett       Date:  2007-09-26       Impact factor: 11.189

5.  Dynamic allele-specific hybridization. A new method for scoring single nucleotide polymorphisms.

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Journal:  Nat Biotechnol       Date:  1999-01       Impact factor: 54.908

6.  An integrated semiconductor device enabling non-optical genome sequencing.

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Journal:  Nature       Date:  2011-07-20       Impact factor: 49.962

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Authors:  Bobby Reddy; Brian R Dorvel; Jonghyun Go; Pradeep R Nair; Oguz H Elibol; Grace M Credo; Jonathan S Daniels; Edmond K C Chow; Xing Su; Madoo Varma; Muhammad A Alam; Rashid Bashir
Journal:  Biomed Microdevices       Date:  2011-04       Impact factor: 2.838

8.  Drug liposome partitioning as a tool for the prediction of human passive intestinal absorption.

Authors:  K Balon; B U Riebesehl; B W Müller
Journal:  Pharm Res       Date:  1999-06       Impact factor: 4.200

9.  Silicon field effect transistors as dual-use sensor-heater hybrids.

Authors:  Bobby Reddy; Oguz H Elibol; Pradeep R Nair; Brian R Dorvel; Felice Butler; Zahab Ahsan; Donald E Bergstrom; Muhammad A Alam; Rashid Bashir
Journal:  Anal Chem       Date:  2011-01-07       Impact factor: 6.986

10.  On-chip nanoliter-volume multiplex TaqMan polymerase chain reaction from a single copy based on counting fluorescence released microchambers.

Authors:  Yasutaka Matsubara; Kagan Kerman; Masaaki Kobayashi; Shouhei Yamamura; Yasutaka Morita; Yuzuru Takamura; Eiichi Tamiya
Journal:  Anal Chem       Date:  2004-11-01       Impact factor: 6.986

View more
  7 in total

1.  Non-faradaic impedance characterization of an evaporating droplet for microfluidic and biosensing applications.

Authors:  Piyush Dak; Aida Ebrahimi; Muhammad A Alam
Journal:  Lab Chip       Date:  2014-07-21       Impact factor: 6.799

2.  Electronic desalting for controlling the ionic environment in droplet-based biosensing platforms.

Authors:  Vikhram Vilasur Swaminathan; Piyush Dak; Bobby Reddy; Eric Salm; Carlos Duarte-Guevara; Yu Zhong; Andrew Fischer; Yi-Shao Liu; Muhammad A Alam; Rashid Bashir
Journal:  Appl Phys Lett       Date:  2015-02-02       Impact factor: 3.791

3.  Evaporation-induced stimulation of bacterial osmoregulation for electrical assessment of cell viability.

Authors:  Aida Ebrahimi; Muhammad Ashraful Alam
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-14       Impact factor: 11.205

4.  Nanotextured superhydrophobic electrodes enable detection of attomolar-scale DNA concentration within a droplet by non-faradaic impedance spectroscopy.

Authors:  Aida Ebrahimi; Piyush Dak; Eric Salm; Susmita Dash; Suresh V Garimella; Rashid Bashir; Muhammad A Alam
Journal:  Lab Chip       Date:  2013-11-07       Impact factor: 6.799

Review 5.  Droplet-based Biosensing for Lab-on-a-Chip, Open Microfluidics Platforms.

Authors:  Piyush Dak; Aida Ebrahimi; Vikhram Swaminathan; Carlos Duarte-Guevara; Rashid Bashir; Muhammad A Alam
Journal:  Biosensors (Basel)       Date:  2016-04-14

6.  Rapid and sensitive detection of viral particles by coupling redox cycling and electrophoretic enrichment.

Authors:  Derrick Butler; Aida Ebrahimi
Journal:  Biosens Bioelectron       Date:  2022-03-18       Impact factor: 12.545

7.  Localized Dielectric Loss Heating in Dielectrophoresis Devices.

Authors:  Tae Joon Kwak; Imtiaz Hossen; Rashid Bashir; Woo-Jin Chang; Chung Hoon Lee
Journal:  Sci Rep       Date:  2019-12-12       Impact factor: 4.379

  7 in total

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