Literature DB >> 17329565

The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth.

Delphine Fleury1, Kristiina Himanen, Gerda Cnops, Hilde Nelissen, Tommaso Matteo Boccardi, Steven Maere, Gerrit T S Beemster, Pia Neyt, Sylvester Anami, Pedro Robles, José Luis Micol, Dirk Inzé, Mieke Van Lijsebettens.   

Abstract

Chromatin modification and transcriptional activation are novel roles for E3 ubiquitin ligase proteins that have been mainly associated with ubiquitin-dependent proteolysis. We identified HISTONE MONOUBIQUITINATION1 (HUB1) (and its homolog HUB2) in Arabidopsis thaliana as RING E3 ligase proteins with a function in organ growth. We show that HUB1 is a functional homolog of the human and yeast BRE1 proteins because it monoubiquitinated histone H2B in an in vitro assay. Hub knockdown mutants had pale leaf coloration, modified leaf shape, reduced rosette biomass, and inhibited primary root growth. One of the alleles had been designated previously as ang4-1. Kinematic analysis of leaf and root growth together with flow cytometry revealed defects in cell cycle activities. The hub1-1 (ang4-1) mutation increased cell cycle duration in young leaves and caused an early entry into the endocycles. Transcript profiling of shoot apical tissues of hub1-1 (ang4-1) indicated that key regulators of the G2-to-M transition were misexpressed. Based on the mutant characterization, we postulate that HUB1 mediates gene activation and cell cycle regulation probably through chromatin modifications.

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Year:  2007        PMID: 17329565      PMCID: PMC1867331          DOI: 10.1105/tpc.106.041319

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  53 in total

1.  Growth stage-based phenotypic analysis of Arabidopsis: a model for high throughput functional genomics in plants.

Authors:  D C Boyes; A M Zayed; R Ascenzi; A J McCaskill; N E Hoffman; K R Davis; J Görlach
Journal:  Plant Cell       Date:  2001-07       Impact factor: 11.277

2.  A mutational analysis of leaf morphogenesis in Arabidopsis thaliana.

Authors:  G Berná; P Robles; J L Micol
Journal:  Genetics       Date:  1999-06       Impact factor: 4.562

3.  Staring, a novel E3 ubiquitin-protein ligase that targets syntaxin 1 for degradation.

Authors:  Lih-Shen Chin; John P Vavalle; Lian Li
Journal:  J Biol Chem       Date:  2002-07-16       Impact factor: 5.157

Review 4.  Cytoskeletal motors in Arabidopsis. Sixty-one kinesins and seventeen myosins.

Authors:  Yuh-Ru Julie Lee; Bo Liu
Journal:  Plant Physiol       Date:  2004-12       Impact factor: 8.340

Review 5.  Cell cycle regulation in plant development.

Authors:  Dirk Inzé; Lieven De Veylder
Journal:  Annu Rev Genet       Date:  2006       Impact factor: 16.830

6.  The cyclin-dependent kinase inhibitor KRP2 controls the onset of the endoreduplication cycle during Arabidopsis leaf development through inhibition of mitotic CDKA;1 kinase complexes.

Authors:  Aurine Verkest; Carmem-Lara de O Manes; Steven Vercruysse; Sara Maes; Els Van Der Schueren; Tom Beeckman; Pascal Genschik; Martin Kuiper; Dirk Inzé; Lieven De Veylder
Journal:  Plant Cell       Date:  2005-04-29       Impact factor: 11.277

7.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

8.  Auxin-mediated cell cycle activation during early lateral root initiation.

Authors:  Kristiina Himanen; Elodie Boucheron; Steffen Vanneste; Janice de Almeida Engler; Dirk Inzé; Tom Beeckman
Journal:  Plant Cell       Date:  2002-10       Impact factor: 11.277

9.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

10.  B1-type cyclin-dependent kinases are essential for the formation of stomatal complexes in Arabidopsis thaliana.

Authors:  Véronique Boudolf; Rosa Barrôco; Janice de Almeida Engler; Aurine Verkest; Tom Beeckman; Mirande Naudts; Dirk Inzé; Lieven De Veylder
Journal:  Plant Cell       Date:  2004-03-18       Impact factor: 11.277

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  67 in total

1.  The Arabidopsis cell division cycle.

Authors:  Crisanto Gutierrez
Journal:  Arabidopsis Book       Date:  2009-03-20

Review 2.  The expanding universe of ubiquitin and ubiquitin-like modifiers.

Authors:  Richard D Vierstra
Journal:  Plant Physiol       Date:  2012-06-12       Impact factor: 8.340

3.  The role of the transcript elongation factors FACT and HUB1 in leaf growth and the induction of flowering.

Authors:  Mieke Van Lijsebettens; Klaus D Grasser
Journal:  Plant Signal Behav       Date:  2010-06-01

4.  OsHUB1 and OsHUB2 interact with SPIN6 and form homo- and hetero-dimers in rice.

Authors:  Hao Zhang; Jinling Liu; Feng He; Zhilong Wang; Yuese Ning; Guo-Liang Wang
Journal:  Plant Signal Behav       Date:  2015

5.  Two tales of chromatin remodeling converge on HUB1.

Authors:  Nancy A Eckardt
Journal:  Plant Cell       Date:  2007-02       Impact factor: 11.277

Review 6.  Histone modifications and dynamic regulation of genome accessibility in plants.

Authors:  Jennifer Pfluger; Doris Wagner
Journal:  Curr Opin Plant Biol       Date:  2007-09-19       Impact factor: 7.834

Review 7.  The ubiquitin-26S proteasome system at the nexus of plant biology.

Authors:  Richard D Vierstra
Journal:  Nat Rev Mol Cell Biol       Date:  2009-05-08       Impact factor: 94.444

Review 8.  Flickin' the ubiquitin switch: the role of H2B ubiquitylation in development.

Authors:  Duncan Edward Wright; Chen-Yi Wang; Cheng-Fu Kao
Journal:  Epigenetics       Date:  2011-10-01       Impact factor: 4.528

9.  Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis.

Authors:  Scott A Saracco; Maria Hansson; Mark Scalf; Joseph M Walker; Lloyd M Smith; Richard D Vierstra
Journal:  Plant J       Date:  2009-03-09       Impact factor: 6.417

10.  Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation.

Authors:  Hilde Nelissen; Steven De Groeve; Delphine Fleury; Pia Neyt; Leonardo Bruno; Maria Beatrice Bitonti; Filip Vandenbussche; Dominique Van der Straeten; Takahiro Yamaguchi; Hirokazu Tsukaya; Erwin Witters; Geert De Jaeger; Andreas Houben; Mieke Van Lijsebettens
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-08       Impact factor: 11.205

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