Literature DB >> 17322891

Nanofabricated quartz cylinders for angular trapping: DNA supercoiling torque detection.

Christopher Deufel1, Scott Forth, Chad R Simmons, Siavash Dejgosha, Michelle D Wang.   

Abstract

We designed and created nanofabricated quartz cylinders well suited for torque application and detection in an angular optical trap. We made the cylinder axis perpendicular to the extraordinary axis of the quartz crystal and chemically functionalized only one end of each cylinder for attachment to a DNA molecule. We directly measured the torque on a single DNA molecule as it underwent a phase transition from B-form to supercoiled P-form.

Mesh:

Substances:

Year:  2007        PMID: 17322891     DOI: 10.1038/nmeth1013

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  51 in total

1.  Torque measurements reveal sequence-specific cooperative transitions in supercoiled DNA.

Authors:  Florian C Oberstrass; Louis E Fernandes; Zev Bryant
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

2.  Passive torque wrench and angular position detection using a single-beam optical trap.

Authors:  James Inman; Scott Forth; Michelle D Wang
Journal:  Opt Lett       Date:  2010-09-01       Impact factor: 3.776

Review 3.  Single-molecule measurements of DNA topology and topoisomerases.

Authors:  Keir C Neuman
Journal:  J Biol Chem       Date:  2010-04-09       Impact factor: 5.157

4.  Energetics at the DNA supercoiling transition.

Authors:  Hergen Brutzer; Nicholas Luzzietti; Daniel Klaue; Ralf Seidel
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

5.  Elasticity and electrostatics of plectonemic DNA.

Authors:  N Clauvelin; B Audoly; S Neukirch
Journal:  Biophys J       Date:  2009-05-06       Impact factor: 4.033

6.  Magnetic tweezers measurement of single molecule torque.

Authors:  Alfredo Celedon; Ilana M Nodelman; Bridget Wildt; Rohit Dewan; Peter Searson; Denis Wirtz; Gregory D Bowman; Sean X Sun
Journal:  Nano Lett       Date:  2009-04       Impact factor: 11.189

Review 7.  Do-it-yourself guide: how to use the modern single-molecule toolkit.

Authors:  Nils G Walter; Cheng-Yen Huang; Anthony J Manzo; Mohamed A Sobhy
Journal:  Nat Methods       Date:  2008-06       Impact factor: 28.547

Review 8.  Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy.

Authors:  Keir C Neuman; Attila Nagy
Journal:  Nat Methods       Date:  2008-06       Impact factor: 28.547

9.  Abrupt buckling transition observed during the plectoneme formation of individual DNA molecules.

Authors:  Scott Forth; Christopher Deufel; Maxim Y Sheinin; Bryan Daniels; James P Sethna; Michelle D Wang
Journal:  Phys Rev Lett       Date:  2008-04-08       Impact factor: 9.161

Review 10.  Single molecule techniques in DNA repair: a primer.

Authors:  Craig D Hughes; Michelle Simons; Cassidy E Mackenzie; Bennett Van Houten; Neil M Kad
Journal:  DNA Repair (Amst)       Date:  2014-05-10
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.