Literature DB >> 17322531

NMR structure of the pseudo-receiver domain of CikA.

Tiyu Gao1, Xiaofan Zhang, Natalia B Ivleva, Susan S Golden, Andy LiWang.   

Abstract

The circadian input kinase (CikA) is a major element of the pathway that provides environmental information to the circadian clock of the cyanobacterium Synechococcus elongatus. CikA is a polypeptide of 754 residues and has three recognizable domains: GAF, histidine protein kinase, and receiver-like. This latter domain of CikA lacks the conserved phospho-accepting aspartyl residue of bona fide receiver domains and is thus a pseudo-receiver (PsR). Recently, it was shown that the PsR domain (1) attenuates the autokinase activity of CikA, (2) is necessary to localize CikA to the cell pole, and (3) is necessary for the destabilization of CikA in the presence of the quinone analog 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone (DBMIB). The solution structure of the PsR domain of CikA, CikAPsR, is presented here. A model of the interaction between the PsR domain and HPK portion of CikA provides a potential explanation for how the PsR domain attenuates the autokinase activity of CikA. Finally, a likely quinone-binding surface on CikAPsR is shown here.

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Year:  2007        PMID: 17322531      PMCID: PMC2203319          DOI: 10.1110/ps.062532007

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  72 in total

1.  Crystal structure of a cyanobacterial phytochrome response regulator.

Authors:  Young Jun Im; Seong-Hwan Rho; Chung-Mo Park; Song-Sook Yang; Jeong-Gu Kang; Jae Young Lee; Pill-Soon Song; Soo Hyun Eom
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

2.  ldpA encodes an iron-sulfur protein involved in light-dependent modulation of the circadian period in the cyanobacterium Synechococcus elongatus PCC 7942.

Authors:  Mitsunori Katayama; Takao Kondo; Jin Xiong; Susan S Golden
Journal:  J Bacteriol       Date:  2003-02       Impact factor: 3.490

3.  The Xplor-NIH NMR molecular structure determination package.

Authors:  Charles D Schwieters; John J Kuszewski; Nico Tjandra; G Marius Clore
Journal:  J Magn Reson       Date:  2003-01       Impact factor: 2.229

4.  Functionally important substructures of circadian clock protein KaiB in a unique tetramer complex.

Authors:  Ryo Iwase; Katsumi Imada; Fumio Hayashi; Tatsuya Uzumaki; Megumi Morishita; Kiyoshi Onai; Yukio Furukawa; Keiichi Namba; Masahiro Ishiura
Journal:  J Biol Chem       Date:  2005-10-13       Impact factor: 5.157

5.  Tetrameric architecture of the circadian clock protein KaiB. A novel interface for intermolecular interactions and its impact on the circadian rhythm.

Authors:  Kenichi Hitomi; Tokitaka Oyama; Seungil Han; Andrew S Arvai; Elizabeth D Getzoff
Journal:  J Biol Chem       Date:  2005-02-16       Impact factor: 5.157

Review 6.  Circadian rhythms from multiple oscillators: lessons from diverse organisms.

Authors:  Deborah Bell-Pedersen; Vincent M Cassone; David J Earnest; Susan S Golden; Paul E Hardin; Terry L Thomas; Mark J Zoran
Journal:  Nat Rev Genet       Date:  2005-07       Impact factor: 53.242

7.  Structure of the entire cytoplasmic portion of a sensor histidine-kinase protein.

Authors:  Alberto Marina; Carey D Waldburger; Wayne A Hendrickson
Journal:  EMBO J       Date:  2005-12-01       Impact factor: 11.598

8.  The structural basis of signal transduction for the response regulator PrrA from Mycobacterium tuberculosis.

Authors:  Elzbieta Nowak; Santosh Panjikar; Peter Konarev; Dmitri I Svergun; Paul A Tucker
Journal:  J Biol Chem       Date:  2006-01-23       Impact factor: 5.157

9.  1H, 13C and 15N chemical shift assignments of the C-terminal, 133-residue pseudo-receiver domain of circadian input kinase (CikA) in Synechococcus elongatus.

Authors:  Tiyu Gao; Xiaofan Zhang; Youlin Xia; Yoonsang Cho; James C Sacchettini; Susan S Golden; Andy C Liwang
Journal:  J Biomol NMR       Date:  2005-07       Impact factor: 2.835

10.  PSEUDO-RESPONSE REGULATORS, PRR9, PRR7 and PRR5, together play essential roles close to the circadian clock of Arabidopsis thaliana.

Authors:  Norihito Nakamichi; Masanori Kita; Shogo Ito; Takafumi Yamashino; Takeshi Mizuno
Journal:  Plant Cell Physiol       Date:  2005-03-13       Impact factor: 4.927

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  17 in total

1.  Proteins found in a CikA interaction assay link the circadian clock, metabolism, and cell division in Synechococcus elongatus.

Authors:  Shannon R Mackey; Jong-Soon Choi; Yohko Kitayama; Hideo Iwasaki; Guogang Dong; Susan S Golden
Journal:  J Bacteriol       Date:  2008-03-14       Impact factor: 3.490

2.  CikA, an Input Pathway Component, Senses the Oxidized Quinone Signal to Generate Phase Delays in the Cyanobacterial Circadian Clock.

Authors:  Pyonghwa Kim; Brianna Porr; Tetsuya Mori; Yong-Sung Kim; Carl H Johnson; Casey O Diekman; Yong-Ick Kim
Journal:  J Biol Rhythms       Date:  2020-01-27       Impact factor: 3.182

Review 3.  Integrating the circadian oscillator into the life of the cyanobacterial cell.

Authors:  S S Golden
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2007

Review 4.  Circadian oscillator proteins across the kingdoms of life: structural aspects.

Authors:  Reena Saini; Mariusz Jaskolski; Seth J Davis
Journal:  BMC Biol       Date:  2019-02-18       Impact factor: 7.431

5.  Oxidized quinones signal onset of darkness directly to the cyanobacterial circadian oscillator.

Authors:  Yong-Ick Kim; David J Vinyard; Gennady M Ananyev; G Charles Dismukes; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-15       Impact factor: 11.205

6.  Profile of Susan S. Golden.

Authors:  Sujata Gupta
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-25       Impact factor: 11.205

7.  Structure of the pilus assembly protein TadZ from Eubacterium rectale: implications for polar localization.

Authors:  Qingping Xu; Beat Christen; Hsiu-Ju Chiu; Lukasz Jaroszewski; Heath E Klock; Mark W Knuth; Mitchell D Miller; Marc-André Elsliger; Ashley M Deacon; Adam Godzik; Scott A Lesley; David H Figurski; Lucy Shapiro; Ian A Wilson
Journal:  Mol Microbiol       Date:  2012-01-18       Impact factor: 3.501

8.  Crystal structure of the redox-active cofactor dibromothymoquinone bound to circadian clock protein KaiA and structural basis for dibromothymoquinone's ability to prevent stimulation of KaiC phosphorylation by KaiA.

Authors:  Rekha Pattanayek; Said K Sidiqi; Martin Egli
Journal:  Biochemistry       Date:  2012-10-05       Impact factor: 3.162

Review 9.  Receiver domain structure and function in response regulator proteins.

Authors:  Robert B Bourret
Journal:  Curr Opin Microbiol       Date:  2010-03-06       Impact factor: 7.934

Review 10.  How a cyanobacterium tells time.

Authors:  Guogang Dong; Susan S Golden
Journal:  Curr Opin Microbiol       Date:  2008-11-10       Impact factor: 7.934

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