Literature DB >> 11847283

Crystal structure of a cyanobacterial phytochrome response regulator.

Young Jun Im1, Seong-Hwan Rho, Chung-Mo Park, Song-Sook Yang, Jeong-Gu Kang, Jae Young Lee, Pill-Soon Song, Soo Hyun Eom.   

Abstract

The two-component signal transduction pathway widespread in prokaryotes, fungi, molds, and some plants involves an elaborate phosphorelay cascade. Rcp1 is the phosphate receiver module in a two-component system controlling the light response of cyanobacteria Synechocystis sp. via cyanobacterial phytochrome Cph1, which recognizes Rcp1 and transfers its phosphoryl group to an aspartate residue in response to light. Here we describe the crystal structure of Rcp1 refined to a crystallographic R-factor of 18.8% at a resolution of 1.9 A. The structure reveals a tightly associated homodimer with monomers comprised of doubly wound five-stranded parallel beta-sheets forming a single-domain protein homologous with the N-terminal activator domain of other response regulators (e.g., chemotaxis protein CheY). The three-dimensional structure of Rcp1 appears consistent with the conserved activation mechanism of phosphate receiver proteins, although in this case, the C-terminal half of its regulatory domain, which undergoes structural changes upon phosphorylation, contributes to the dimerization interface. The involvement of the residues undergoing phosphorylation-induced conformational changes at the dimeric interface suggests that dimerization of Rcp1 may be regulated by phosphorylation, which could affect the interaction of Rcp1 with downstream target molecules.

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Year:  2002        PMID: 11847283      PMCID: PMC2373457          DOI: 10.1110/ps.39102

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  42 in total

1.  Crystallization and preliminary X-ray crystallographic studies of response regulator for cyanobacterial phytochrome, Rcp1.

Authors:  Y J Im; C M Park; J I Kim; S S Yang; J G Kang; S H Rho; J I Kim; W K Song; P S Song; S H Eom
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-11

Review 2.  Histidine kinases and response regulator proteins in two-component signaling systems.

Authors:  A H West; A M Stock
Journal:  Trends Biochem Sci       Date:  2001-06       Impact factor: 13.807

3.  Crystal structures of CheY mutants Y106W and T87I/Y106W. CheY activation correlates with movement of residue 106.

Authors:  X Zhu; J Rebello; P Matsumura; K Volz
Journal:  J Biol Chem       Date:  1997-02-21       Impact factor: 5.157

Review 4.  The two-component signaling pathway of bacterial chemotaxis: a molecular view of signal transduction by receptors, kinases, and adaptation enzymes.

Authors:  J J Falke; R B Bass; S L Butler; S A Chervitz; M A Danielson
Journal:  Annu Rev Cell Dev Biol       Date:  1997       Impact factor: 13.827

5.  Structure of the Escherichia coli response regulator NarL.

Authors:  I Baikalov; I Schröder; M Kaczor-Grzeskowiak; K Grzeskowiak; R P Gunsalus; R E Dickerson
Journal:  Biochemistry       Date:  1996-08-27       Impact factor: 3.162

6.  Photomovement of the gliding cyanobacterium Synechocystis sp. PCC 6803.

Authors:  J S Choi; Y H Chung; Y J Moon; C Kim; M Watanabe; P S Song; C O Joe; L Bogorad; Y M Park
Journal:  Photochem Photobiol       Date:  1999-07       Impact factor: 3.421

7.  1H, 15N, and 13C backbone chemical shift assignments, secondary structure, and magnesium-binding characteristics of the Bacillus subtilis response regulator, Spo0F, determined by heteronuclear high-resolution NMR.

Authors:  V A Feher; J W Zapf; J A Hoch; F W Dahlquist; J M Whiteley; J Cavanagh
Journal:  Protein Sci       Date:  1995-09       Impact factor: 6.725

8.  Three-dimensional crystal structure of the transcription factor PhoB receiver domain.

Authors:  M Solá; F X Gomis-Rüth; L Serrano; A González; M Coll
Journal:  J Mol Biol       Date:  1999-01-15       Impact factor: 5.469

9.  Structure of the Mg(2+)-bound form of CheY and mechanism of phosphoryl transfer in bacterial chemotaxis.

Authors:  A M Stock; E Martinez-Hackert; B F Rasmussen; A H West; J B Stock; D Ringe; G A Petsko
Journal:  Biochemistry       Date:  1993-12-14       Impact factor: 3.162

10.  Three-dimensional solution structure of the N-terminal receiver domain of NTRC.

Authors:  B F Volkman; M J Nohaile; N K Amy; S Kustu; D E Wemmer
Journal:  Biochemistry       Date:  1995-01-31       Impact factor: 3.162

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  13 in total

1.  The crystal structure of the phosphorylation domain in PhoP reveals a functional tandem association mediated by an asymmetric interface.

Authors:  Catherine Birck; Yinghua Chen; F Marion Hulett; Jean-Pierre Samama
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

2.  Crystal structures of two cyanobacterial response regulators in apo- and phosphorylated form reveal a novel dimerization motif of phytochrome-associated response regulators.

Authors:  C Benda; C Scheufler; N Tandeau de Marsac; W Gärtner
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

3.  Crystal structure of the response regulator 02 receiver domain, the essential YycF two-component system of Streptococcus pneumoniae in both complexed and native states.

Authors:  Colin J Bent; Neil W Isaacs; Timothy J Mitchell; Alan Riboldi-Tunnicliffe
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

4.  Conformational changes of Spo0F along the phosphotransfer pathway.

Authors:  Kottayil I Varughese
Journal:  J Bacteriol       Date:  2005-12       Impact factor: 3.490

5.  Probing Mechanistic Similarities between Response Regulator Signaling Proteins and Haloacid Dehalogenase Phosphatases.

Authors:  Robert M Immormino; Chrystal A Starbird; Ruth E Silversmith; Robert B Bourret
Journal:  Biochemistry       Date:  2015-05-28       Impact factor: 3.162

6.  NMR structure of the pseudo-receiver domain of CikA.

Authors:  Tiyu Gao; Xiaofan Zhang; Natalia B Ivleva; Susan S Golden; Andy LiWang
Journal:  Protein Sci       Date:  2007-03       Impact factor: 6.725

7.  Structure of the response regulator RPA3017 involved in red-light signaling in Rhodopseudomonas palustris.

Authors:  Xuefei Yang; Xiaoli Zeng; Keith Moffat; Xiaojing Yang
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-09-23       Impact factor: 1.056

8.  Arm-in-Arm Response Regulator Dimers Promote Intermolecular Signal Transduction.

Authors:  Anna W Baker; Kenneth A Satyshur; Neydis Moreno Morales; Katrina T Forest
Journal:  J Bacteriol       Date:  2016-03-31       Impact factor: 3.490

Review 9.  Molecular Mechanisms of Two-Component Signal Transduction.

Authors:  Christopher P Zschiedrich; Victoria Keidel; Hendrik Szurmant
Journal:  J Mol Biol       Date:  2016-08-09       Impact factor: 5.469

Review 10.  Molecular strategies for phosphorylation-mediated regulation of response regulator activity.

Authors:  Rong Gao; Ann M Stock
Journal:  Curr Opin Microbiol       Date:  2010-01-14       Impact factor: 7.934

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