Literature DB >> 17313228

Symmetry-based constant-time homonuclear dipolar recoupling in solid state NMR.

Robert Tycko1.   

Abstract

Constant-time dipolar recoupling pulse sequences are advantageous in structural studies by solid state nuclear magnetic resonance (NMR) with magic-angle spinning (MAS) because they yield experimental data that are relatively insensitive to radio-frequency pulse imperfections and nuclear spin relaxation processes. A new approach to the construction of constant-time homonuclear dipolar recoupling sequences is described, based on symmetry properties of the recoupled dipole-dipole interaction Hamiltonian under cyclic displacements in time with respect to the MAS sample rotation period. A specific symmetry-based pulse sequence called PITHIRDS-CT is introduced and demonstrated experimentally. (13)C NMR data for singly-(13)C-labeled amino acid powders and amyloid fibrils indicate the effectiveness of PITHIRDS-CT in measurements of intermolecular distances in solids. (15)N-detected and (13)C-detected measurements of intramolecular (15)N-(15)N distances in peptides with alpha-helical and beta-sheet structures indicate the utility of PITHIRDS-CT in studies of molecular conformations, especially measurements of backbone psi torsion angles in peptides containing uniformly (15)N- and (13)C-labeled amino acids.

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Year:  2007        PMID: 17313228     DOI: 10.1063/1.2437194

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  64 in total

1.  The α-helical C-terminal domain of full-length recombinant PrP converts to an in-register parallel β-sheet structure in PrP fibrils: evidence from solid state nuclear magnetic resonance.

Authors:  Robert Tycko; Regina Savtchenko; Valeriy G Ostapchenko; Natallia Makarava; Ilia V Baskakov
Journal:  Biochemistry       Date:  2010-11-09       Impact factor: 3.162

2.  Amyloid of the Candida albicans Ure2p prion domain is infectious and has an in-register parallel β-sheet structure.

Authors:  Abbi Engel; Frank Shewmaker; Herman K Edskes; Fred Dyda; Reed B Wickner
Journal:  Biochemistry       Date:  2011-06-15       Impact factor: 3.162

3.  Antiparallel β-sheet architecture in Iowa-mutant β-amyloid fibrils.

Authors:  Wei Qiang; Wai-Ming Yau; Yongquan Luo; Mark P Mattson; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-08       Impact factor: 11.205

4.  Segmental polymorphism in a functional amyloid.

Authors:  Kan-Nian Hu; Ryan P McGlinchey; Reed B Wickner; Robert Tycko
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

5.  Repeat domains of melanosome matrix protein Pmel17 orthologs form amyloid fibrils at the acidic melanosomal pH.

Authors:  Ryan P McGlinchey; Frank Shewmaker; Kan-Nian Hu; Peter McPhie; Robert Tycko; Reed B Wickner
Journal:  J Biol Chem       Date:  2010-12-10       Impact factor: 5.157

Review 6.  Prion amyloid structure explains templating: how proteins can be genes.

Authors:  Reed B Wickner; Frank Shewmaker; Herman Edskes; Dmitry Kryndushkin; Julie Nemecek; Ryan McGlinchey; David Bateman; Chia-Lin Winchester
Journal:  FEMS Yeast Res       Date:  2010-12       Impact factor: 2.796

7.  Molecular structure of monomorphic peptide fibrils within a kinetically trapped hydrogel network.

Authors:  Katelyn Nagy-Smith; Eric Moore; Joel Schneider; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-27       Impact factor: 11.205

8.  The on-fibrillation-pathway membrane content leakage and off-fibrillation-pathway lipid mixing induced by 40-residue β-amyloid peptides in biologically relevant model liposomes.

Authors:  Qinghui Cheng; Zhi-Wen Hu; Katelynne E Doherty; Yuto J Tobin-Miyaji; Wei Qiang
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-03-13       Impact factor: 3.747

9.  Time-Dependent Lipid Dynamics, Organization and Peptide-Lipid Interaction in Phospholipid Bilayers with Incorporated β-Amyloid Oligomers.

Authors:  Wei Qiang; Katelynne E Doherty; Lukas M Klees; Yuto Tobin-Miyaji
Journal:  J Phys Chem Lett       Date:  2020-09-18       Impact factor: 6.475

Review 10.  Biomolecular Assemblies: Moving from Observation to Predictive Design.

Authors:  Corey J Wilson; Andreas S Bommarius; Julie A Champion; Yury O Chernoff; David G Lynn; Anant K Paravastu; Chen Liang; Ming-Chien Hsieh; Jennifer M Heemstra
Journal:  Chem Rev       Date:  2018-10-03       Impact factor: 60.622

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