Literature DB >> 17310144

MAPK-mediated bimodal gene expression and adaptive gradient sensing in yeast.

Saurabh Paliwal1, Pablo A Iglesias, Kyle Campbell, Zoe Hilioti, Alex Groisman, Andre Levchenko.   

Abstract

The mating pathway in Saccharomyces cerevisiae has been the focus of considerable research effort, yet many quantitative aspects of its regulation still remain unknown. Using an integrated approach involving experiments in microfluidic chips and computational modelling, we studied gene expression and phenotypic changes associated with the mating response under well-defined pheromone gradients. Here we report a combination of switch-like and graded pathway responses leading to stochastic phenotype determination in a specific range of pheromone concentrations. Furthermore, we show that these responses are critically dependent on mitogen-activated protein kinase (MAPK)-mediated regulation of the activity of the pheromone-response-specific transcription factor, Ste12, as well as on the autoregulatory feedback of Ste12. In particular, both the switch-like characteristics and sensitivity of gene expression in shmooing cells to pheromone concentration were significantly diminished in cells lacking Kss1, one of the MAP kinases activated in the mating pathway. In addition, the dynamic range of gradient sensing of Kss1-deficient cells was reduced compared with wild type. We thus provide unsuspected functional significance for this kinase in regulation of the mating response.

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Year:  2007        PMID: 17310144     DOI: 10.1038/nature05561

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  142 in total

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Journal:  Annu Rev Biomed Eng       Date:  2010-08-15       Impact factor: 9.590

2.  Variability in G-protein-coupled signaling studied with microfluidic devices.

Authors:  Xiaoyan Robert Bao; Iain D C Fraser; Estelle A Wall; Stephen R Quake; Melvin I Simon
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

3.  Limits to the precision of gradient sensing with spatial communication and temporal integration.

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Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-20       Impact factor: 11.205

4.  Microfluidic flow-free generation of chemical concentration gradients.

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5.  Versatile, simple-to-use microfluidic cell-culturing chip for long-term, high-resolution, time-lapse imaging.

Authors:  Olivier Frey; Fabian Rudolf; Gregor W Schmidt; Andreas Hierlemann
Journal:  Anal Chem       Date:  2015-04-10       Impact factor: 6.986

6.  Polar stimulation and constrained cell migration in microfluidic channels.

Authors:  Daniel Irimia; Guillaume Charras; Nitin Agrawal; Timothy Mitchison; Mehmet Toner
Journal:  Lab Chip       Date:  2007-09-04       Impact factor: 6.799

Review 7.  Biomolecular gradients in cell culture systems.

Authors:  Thomas M Keenan; Albert Folch
Journal:  Lab Chip       Date:  2007-12-06       Impact factor: 6.799

8.  Counteractive control of polarized morphogenesis during mating by mitogen-activated protein kinase Fus3 and G1 cyclin-dependent kinase.

Authors:  Lu Yu; Maosong Qi; Mark A Sheff; Elaine A Elion
Journal:  Mol Biol Cell       Date:  2008-02-06       Impact factor: 4.138

9.  Dynamic analysis of MAPK signaling using a high-throughput microfluidic single-cell imaging platform.

Authors:  R J Taylor; D Falconnet; A Niemistö; S A Ramsey; S Prinz; I Shmulevich; T Galitski; C L Hansen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-17       Impact factor: 11.205

10.  Signal transduction: turning a switch into a rheostat.

Authors:  Lee Bardwell
Journal:  Curr Biol       Date:  2008-10-14       Impact factor: 10.834

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