Literature DB >> 17275095

Causal entropies--a measure for determining changes in the temporal organization of neural systems.

Jack Waddell1, Rhonda Dzakpasu, Victoria Booth, Brett Riley, Jonathan Reasor, Gina Poe, Michal Zochowski.   

Abstract

We propose a novel measure to detect temporal ordering in the activity of individual neurons in a local network, which is thought to be a hallmark of activity-dependent synaptic modifications during learning. The measure, called causal entropy, is based on the time-adaptive detection of asymmetries in the relative temporal patterning between neuronal pairs. We characterize properties of the measure on both simulated data and experimental multiunit recordings of hippocampal neurons from the awake, behaving rat, and show that the metric can more readily detect those asymmetries than standard cross correlation-based techniques, especially since the temporal sensitivity of causal entropy can detect such changes rapidly and dynamically.

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Year:  2006        PMID: 17275095      PMCID: PMC2693078          DOI: 10.1016/j.jneumeth.2006.12.008

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  24 in total

1.  Ultra-miniature headstage with 6-channel drive and vacuum-assisted micro-wire implantation for chronic recording from the neocortex.

Authors:  S Venkatachalam; M S Fee; D Kleinfeld
Journal:  J Neurosci Methods       Date:  1999-08-01       Impact factor: 2.390

2.  Rapid feature selective neuronal synchronization through correlated latency shifting.

Authors:  P Fries; S Neuenschwander; A K Engel; R Goebel; W Singer
Journal:  Nat Neurosci       Date:  2001-02       Impact factor: 24.884

3.  A spatial memory task appropriate for electrophysiological recordings.

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Journal:  J Neurosci Methods       Date:  2002-11-15       Impact factor: 2.390

4.  Entropy and information in neural spike trains: progress on the sampling problem.

Authors:  Ilya Nemenman; William Bialek; Rob de Ruyter van Steveninck
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-05-24

5.  Analyzing functional connectivity using a network likelihood model of ensemble neural spiking activity.

Authors:  Murat Okatan; Matthew A Wilson; Emery N Brown
Journal:  Neural Comput       Date:  2005-09       Impact factor: 2.026

6.  Frequency decomposition of conditional Granger causality and application to multivariate neural field potential data.

Authors:  Yonghong Chen; Steven L Bressler; Mingzhou Ding
Journal:  J Neurosci Methods       Date:  2005-08-15       Impact factor: 2.390

7.  Vector reconstruction from firing rates.

Authors:  E Salinas; L F Abbott
Journal:  J Comput Neurosci       Date:  1994-06       Impact factor: 1.621

8.  Maximum likelihood identification of neural point process systems.

Authors:  E S Chornoboy; L P Schramm; A F Karr
Journal:  Biol Cybern       Date:  1988       Impact factor: 2.086

9.  Identification of network-level coding units for real-time representation of episodic experiences in the hippocampus.

Authors:  Longnian Lin; Remus Osan; Shy Shoham; Wenjun Jin; Wenqi Zuo; Joe Z Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-15       Impact factor: 11.205

10.  Decreased neuronal synchronization during experimental seizures.

Authors:  Theoden I Netoff; Steven J Schiff
Journal:  J Neurosci       Date:  2002-08-15       Impact factor: 6.167

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  3 in total

1.  Memory formation: from network structure to neural dynamics.

Authors:  Sarah Feldt; Jane X Wang; Vaughn L Hetrick; Joshua D Berke; Michal Zochowski
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2010-05-13       Impact factor: 4.226

2.  Assessing directionality and strength of coupling through symbolic analysis: an application to epilepsy patients.

Authors:  Klaus Lehnertz; Henning Dickten
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2015-02-13       Impact factor: 4.226

3.  Estimating temporal causal interaction between spike trains with permutation and transfer entropy.

Authors:  Zhaohui Li; Xiaoli Li
Journal:  PLoS One       Date:  2013-08-05       Impact factor: 3.240

  3 in total

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