Literature DB >> 17257868

GAVA: spectral simulation for in vivo MRS applications.

Brian J Soher1, Karl Young, Aaron Bernstein, Zakaria Aygula, Andrew A Maudsley.   

Abstract

An application that provides a flexible and easy to use interface to the GAMMA spectral simulation package is described that is targeted at investigations using in vivo MR spectroscopic methods. The program makes available a number of widely used spatially localized MRS pulse sequences and NMR parameters for commonly observed tissue metabolites, enabling spectra to be simulated for any pulse sequence parameter and viewed in an integrated display. The application is interfaced with a database for storage of all simulation parameters and results of the simulations. This application provides a convenient method for generating a priori spectral information used in parametric spectral analyses and for visual examination of the effects of difference pulse sequences and parameter settings.

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Year:  2007        PMID: 17257868      PMCID: PMC1940040          DOI: 10.1016/j.jmr.2007.01.005

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  41 in total

1.  Localized two-dimensional shift correlated MR spectroscopy of human brain.

Authors:  M A Thomas; K Yue; N Binesh; P Davanzo; A Kumar; B Siegel; M Frye; J Curran; R Lufkin; P Martin; B Guze
Journal:  Magn Reson Med       Date:  2001-07       Impact factor: 4.668

2.  Optimizing PRESS localized citrate detection at 3 Tesla.

Authors:  Andreas H Trabesinger; Dieter Meier; Ulrike Dydak; Rolf Lamerichs; Peter Boesiger
Journal:  Magn Reson Med       Date:  2005-07       Impact factor: 4.668

3.  Improved quantification of in vivo 1H NMR spectra by optimization of signal acquisition and processing and by incorporation of prior knowledge into the spectral fitting.

Authors:  A A de Graaf; W M Bovée
Journal:  Magn Reson Med       Date:  1990-08       Impact factor: 4.668

4.  Automated spectral analysis II: application of wavelet shrinkage for characterization of non-parameterized signals.

Authors:  K Young; B J Soher; A A Maudsley
Journal:  Magn Reson Med       Date:  1998-12       Impact factor: 4.668

5.  SIMPLTN, a Program for the Simulation of Pulse NMR Spectra

Authors: 
Journal:  J Magn Reson A       Date:  1996-11

6.  Effects of brain membranes on 1H nuclear magnetic resonance signal intensity of ethanol in vitro.

Authors:  V Govindaraju; D J Meyerhoff; A A Maudsley; M Vermathen; M W Weiner
Journal:  Alcohol Alcohol       Date:  1997 Nov-Dec       Impact factor: 2.826

7.  Volume-localized two-dimensional correlated magnetic resonance spectroscopy of human breast cancer.

Authors:  M A Thomas; N Binesh; K Yue; N DeBruhl
Journal:  J Magn Reson Imaging       Date:  2001-08       Impact factor: 4.813

8.  Brain gamma-aminobutyric acid measurement by proton double-quantum filtering with selective J rewinding.

Authors:  Changho Choi; Nicholas J Coupland; Christopher C Hanstock; Catherine J Ogilvie; Andrea C M Higgins; Dan Gheorghiu; Peter S Allen
Journal:  Magn Reson Med       Date:  2005-08       Impact factor: 4.668

9.  Versatile frequency domain fitting using time domain models and prior knowledge.

Authors:  J Slotboom; C Boesch; R Kreis
Journal:  Magn Reson Med       Date:  1998-06       Impact factor: 4.668

10.  Volumetric proton spectroscopic imaging of mild traumatic brain injury.

Authors:  Varanavasi Govindaraju; Grant E Gauger; Geoffrey T Manley; Andreas Ebel; Michele Meeker; Andrew A Maudsley
Journal:  AJNR Am J Neuroradiol       Date:  2004-05       Impact factor: 3.825

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  47 in total

1.  Evaluation of Myo-Inositol as a Potential Biomarker for Depression in Schizophrenia.

Authors:  Joshua Chiappelli; Laura M Rowland; S Andrea Wijtenburg; Florian Muellerklein; Malle Tagamets; Robert P McMahon; Frank Gaston; Peter Kochunov; L Elliot Hong
Journal:  Neuropsychopharmacology       Date:  2015-02-27       Impact factor: 7.853

2.  Prediction of conversion from mild cognitive impairment to Alzheimer disease based on bayesian data mining with ensemble learning.

Authors:  R Chen; K Young; L L Chao; B Miller; K Yaffe; M W Weiner; E H Herskovits
Journal:  Neuroradiol J       Date:  2012-03-01

3.  Two-dimensional linear-combination model fitting of magnetic resonance spectra to define the macromolecule baseline using FiTAID, a Fitting Tool for Arrays of Interrelated Datasets.

Authors:  Daniel G Q Chong; Roland Kreis; Christine S Bolliger; Chris Boesch; Johannes Slotboom
Journal:  MAGMA       Date:  2011-03-20       Impact factor: 2.310

4.  Chronic cocaine exposure induces putamen glutamate and glutamine metabolite abnormalities in squirrel monkeys.

Authors:  Xiaoxu Liu; J Eric Jensen; Timothy E Gillis; Chun S Zuo; Andrew P Prescot; Melanie Brimson; Kenroy Cayetano; Perry F Renshaw; Marc J Kaufman
Journal:  Psychopharmacology (Berl)       Date:  2011-04-15       Impact factor: 4.530

Review 5.  Quantification in magnetic resonance spectroscopy based on semi-parametric approaches.

Authors:  Danielle Graveron-Demilly
Journal:  MAGMA       Date:  2013-07-28       Impact factor: 2.310

6.  Volumetric spectroscopic imaging of glioblastoma multiforme radiation treatment volumes.

Authors:  N Andres Parra; Andrew A Maudsley; Rakesh K Gupta; Fazilat Ishkanian; Kris Huang; Gail R Walker; Kyle Padgett; Bhaswati Roy; Joseph Panoff; Arnold Markoe; Radka Stoyanova
Journal:  Int J Radiat Oncol Biol Phys       Date:  2014-07-24       Impact factor: 7.038

7.  The relationship between Gulf War illness, brain N-acetylaspartate, and post-traumatic stress disorder.

Authors:  Michael W Weiner; Dieter J Meyerhoff; Thomas C Neylan; Jennifer Hlavin; Erin R Ramage; Daniel McCoy; Colin Studholme; Valerie Cardenas; Charles Marmar; Diana Truran; Philip W Chu; John Kornak; Clement E Furlong; Charles McCarthy
Journal:  Mil Med       Date:  2011-08       Impact factor: 1.437

8.  Salivary kynurenic acid response to psychological stress: inverse relationship to cortical glutamate in schizophrenia.

Authors:  Joshua Chiappelli; Laura M Rowland; Francesca M Notarangelo; S Andrea Wijtenburg; Marian A R Thomas; Ana Pocivavsek; Aaron Jones; Krista Wisner; Peter Kochunov; Robert Schwarcz; L Elliot Hong
Journal:  Neuropsychopharmacology       Date:  2018-04-18       Impact factor: 7.853

9.  TMS evoked N100 reflects local GABA and glutamate balance.

Authors:  Xiaoming Du; Laura M Rowland; Ann Summerfelt; Andrea Wijtenburg; Joshua Chiappelli; Krista Wisner; Peter Kochunov; Fow-Sen Choa; L Elliot Hong
Journal:  Brain Stimul       Date:  2018-05-04       Impact factor: 8.955

10.  Reproducibility of phase rotation stimulated echo acquisition mode at 3T in schizophrenia: Emphasis on glutamine.

Authors:  Juan R Bustillo; Nathan Rediske; Thomas Jones; Laura M Rowland; Christopher Abbott; S Andrea Wijtenburg
Journal:  Magn Reson Med       Date:  2015-03-11       Impact factor: 4.668

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