Literature DB >> 17248867

Maintenance of Genetic Variability under the Joint Effect of Mutation, Selection and Random Drift.

W H Li1.   

Abstract

Formulae are developed for the distribution of allele frequencies (the frequency spectrum), the mean number of alleles in a sample, and the mean and variance of heterozygosity under mutation pressure and under either genic or recessive selection. Numerical computations are carried out by using these formulae and Watterson's (1977) formula for the distribution of allele frequencies under overdominant selection. The following properties are observed: (1) The effect of selection on the distribution of allele frequencies is slight when 4Ns </= 4, but becomes strong when 4Ns becomes larger than 10, where N denotes the effective size and s the selective difference between alleles. Genic selection and recessive selection tend to force the distribution to be U-shaped, whereas overdominant selection has the opposite tendency. (2) The mean total number of alleles in a sample is much more strongly affected by selection than the mean number of rare alleles in a sample. (3) Even slight heterozygote advantage, as small as 10(-5), increases considerably the mean heterozygosity of a population, as compared to the case of neutral mutations. On the other hand, even slight genic or recessive selection causes a great reduction in heterozygosity when population size is large. (4) As a test statistic, the variance of heterozygosity can be used to detect the presence of selection, though it is not efficient when the selection intensity is very weak, say when 4Ns is around 4 or less. A model, which is somewhat similar to Ohta's (1976) model of slightly deleterious mutations, has been proposed to explain the following general patterns of genic variation: (i) There seems to be an upper limit for the observed average heterozygosities. (ii) The distribution of allele frequencies is U-shaped for every species surveyed. (iii) Most of the species surveyed tend to have an excess of rare alleles as compared with that expected under the neutral mutation hypothesis.

Year:  1978        PMID: 17248867      PMCID: PMC1213895     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  10 in total

1.  Drift variances of heterozygosity and genetic distance in transient states.

Authors:  W H Li; M Nei
Journal:  Genet Res       Date:  1975-06       Impact factor: 1.588

2.  THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION.

Authors:  M KIMURA; J F CROW
Journal:  Genetics       Date:  1964-04       Impact factor: 4.562

3.  Stochastic processes and distribution of gene frequencies under natural selection.

Authors:  M KIMURA
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1955

4.  Role of very slightly deleterious mutations in molecular evolution and polymorphism.

Authors:  T Ohta
Journal:  Theor Popul Biol       Date:  1976-12       Impact factor: 1.570

5.  Infinite allele model with varying mutation rate.

Authors:  M Nei; R Chakraborty; P A Fuerst
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

6.  The transient distribution of allele frequencies under mutation pressure.

Authors:  M Nei; W H Li
Journal:  Genet Res       Date:  1976-12       Impact factor: 1.588

7.  Distribution of allelic frequencies in a finite population under stepwise production of neutral alleles.

Authors:  M Kimura; T Ohta
Journal:  Proc Natl Acad Sci U S A       Date:  1975-07       Impact factor: 11.205

8.  The homozygosity test of neutrality.

Authors:  G A Watterson
Journal:  Genetics       Date:  1978-02       Impact factor: 4.562

9.  Statistical studies on protein polymorphism in natural populations. I. Distribution of single locus heterozygosity.

Authors:  P A Fuerst; R Chakraborty; M Nei
Journal:  Genetics       Date:  1977-06       Impact factor: 4.562

10.  Genetic variation in natural populations of five Drosophila species and the hypothesis of the selective neutrality of protein polymorphisms.

Authors:  F J Ayala; M L Tracey; L G Barr; J F McDonald; S Pérez-Salas
Journal:  Genetics       Date:  1974-06       Impact factor: 4.562

  10 in total
  25 in total

1.  A study on a nearly neutral mutation model in finite populations.

Authors:  H Tachida
Journal:  Genetics       Date:  1991-05       Impact factor: 4.562

2.  Harnessing genomics for delineating conservation units.

Authors:  W Chris Funk; John K McKay; Paul A Hohenlohe; Fred W Allendorf
Journal:  Trends Ecol Evol       Date:  2012-06-21       Impact factor: 17.712

3.  Model of effectively neutral mutations in which selective constraint is incorporated.

Authors:  M Kimura
Journal:  Proc Natl Acad Sci U S A       Date:  1979-07       Impact factor: 11.205

4.  Statistical Studies on Protein Polymorphism in Natural Populations. III. Distribution of Allele Frequencies and the Number of Alleles per Locus.

Authors:  R Chakraborty; P A Fuerst; M Nei
Journal:  Genetics       Date:  1980-04       Impact factor: 4.562

Review 5.  Near neutrality: leading edge of the neutral theory of molecular evolution.

Authors:  Austin L Hughes
Journal:  Ann N Y Acad Sci       Date:  2008       Impact factor: 5.691

6.  Neutral evolution of robustness in Drosophila microRNA precursors.

Authors:  Nicholas Price; Reed A Cartwright; Niv Sabath; Dan Graur; Ricardo B R Azevedo
Journal:  Mol Biol Evol       Date:  2011-01-31       Impact factor: 16.240

7.  Accelerated simulation of evolutionary trajectories in origin-fixation models.

Authors:  Ashley I Teufel; Claus O Wilke
Journal:  J R Soc Interface       Date:  2017-02       Impact factor: 4.118

8.  A penalized-likelihood method to estimate the distribution of selection coefficients from phylogenetic data.

Authors:  Asif U Tamuri; Nick Goldman; Mario dos Reis
Journal:  Genetics       Date:  2014-02-14       Impact factor: 4.562

9.  Molecular clock rates at loci under stabilizing selection.

Authors:  P Foley
Journal:  Proc Natl Acad Sci U S A       Date:  1987-11       Impact factor: 11.205

10.  Linking extinction-colonization dynamics to genetic structure in a salamander metapopulation.

Authors:  Bradley J Cosentino; Christopher A Phillips; Robert L Schooley; Winsor H Lowe; Marlis R Douglas
Journal:  Proc Biol Sci       Date:  2011-11-23       Impact factor: 5.349

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.