Literature DB >> 17222426

Crystal structure of the N-terminal domain of the TyrR transcription factor responsible for gene regulation of aromatic amino acid biosynthesis and transport in Escherichia coli K12.

D Verger1, P D Carr, T Kwok, D L Ollis.   

Abstract

The X-ray structure of the N-terminal domain of TyrR has been solved to a resolution of 2.3 A. It reveals a modular protein containing an ACT domain, a connecting helix, a PAS domain and a C-terminal helix. Two dimers are present in the asymmetric unit with one monomer of each pair exhibiting a large rigid-body movement that results in a hinging around residue 74 of approximately 50 degrees . The structure of the dimer is discussed with reference to other transcription regulator proteins. Putative binding sites are identified for the aromatic amino acid cofactors.

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Year:  2006        PMID: 17222426     DOI: 10.1016/j.jmb.2006.12.018

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  8 in total

1.  Altered oligomerization properties of N316 mutants of Escherichia coli TyrR.

Authors:  Takashi Koyanagi; Takane Katayama; Hideyuki Suzuki; Hidehiko Kumagai
Journal:  J Bacteriol       Date:  2008-10-17       Impact factor: 3.490

2.  Engineering ligand-specific biosensors for aromatic amino acids and neurochemicals.

Authors:  Austin G Rottinghaus; Chenggang Xi; Matthew B Amrofell; Hyojeong Yi; Tae Seok Moon
Journal:  Cell Syst       Date:  2021-11-11       Impact factor: 10.304

Review 3.  The role of bacterial enhancer binding proteins as specialized activators of σ54-dependent transcription.

Authors:  Matthew Bush; Ray Dixon
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

4.  Crystal structure of the heterodimeric CLOCK:BMAL1 transcriptional activator complex.

Authors:  Nian Huang; Yogarany Chelliah; Yongli Shan; Clinton A Taylor; Seung-Hee Yoo; Carrie Partch; Carla B Green; Hong Zhang; Joseph S Takahashi
Journal:  Science       Date:  2012-05-31       Impact factor: 47.728

5.  GcsR, a TyrR-Like Enhancer-Binding Protein, Regulates Expression of the Glycine Cleavage System in Pseudomonas aeruginosa PAO1.

Authors:  Zaara Sarwar; Benjamin R Lundgren; Michael T Grassa; Michael X Wang; Megan Gribble; Jennifer F Moffat; Christopher T Nomura
Journal:  mSphere       Date:  2016-04-27       Impact factor: 4.389

6.  TyrR is involved in the transcriptional regulation of biofilm formation and D-alanine catabolism in Azospirillum brasilense Sp7.

Authors:  Saúl Jijón-Moreno; Beatriz Eugenia Baca; Diana Carolina Castro-Fernández; Alberto Ramírez-Mata
Journal:  PLoS One       Date:  2019-02-14       Impact factor: 3.240

7.  Activation by TyrR in Escherichia coli K-12 by Interaction between TyrR and the α-Subunit of RNA Polymerase.

Authors:  Helen Camakaris; Ji Yang; Tadashi Fujii; James Pittard
Journal:  J Bacteriol       Date:  2021-09-08       Impact factor: 3.490

8.  Multi-PAS domain-mediated protein oligomerization of PpsR from Rhodobacter sphaeroides.

Authors:  Udo Heintz; Anton Meinhart; Andreas Winkler
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-02-27
  8 in total

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