Literature DB >> 17209030

Amplification of lac cannot account for adaptive mutation to Lac+ in Escherichia coli.

Jeffrey D Stumpf1, Anthony R Poteete, Patricia L Foster.   

Abstract

When the Lac- strain of Escherichia coli, FC40, is incubated with lactose as its sole carbon and energy source, Lac+ revertants arise at a constant rate, a phenomenon known as adaptive mutation. Two alternative models for adaptive mutation have been proposed: (i) recombination-dependent mutation, which specifies that recombination occurring in nongrowing cells stimulates error-prone DNA synthesis, and (ii) amplification-dependent mutation, which specifies that amplification of the lac region and growth of the amplifying cells creates enough DNA replication to produce mutations at the normal rate. Here, we examined several of the predictions of the amplification-dependent mutation model and found that they are not fulfilled. First, inhibition of adaptive mutation by a gene that is toxic when overexpressed does not depend on the proximity of the gene to lac. Second, mutation at a second locus during selection for Lac+ revertants is also independent of the proximity of the locus to lac. Third, mutation at a second locus on the episome occurs even when the lac allele under selection is on the chromosome. Our results support the hypothesis that most Lac+ mutants that appear during lactose selection are true revertants that arise in a single step from Lac- cells, not from a population of growing or amplifying precursor cells.

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Year:  2007        PMID: 17209030      PMCID: PMC1899370          DOI: 10.1128/JB.01706-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  54 in total

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2.  Error-prone polymerase, DNA polymerase IV, is responsible for transient hypermutation during adaptive mutation in Escherichia coli.

Authors:  Joshua D Tompkins; Jennifer L Nelson; Jill C Hazel; Stacy L Leugers; Jeffrey D Stumpf; Patricia L Foster
Journal:  J Bacteriol       Date:  2003-06       Impact factor: 3.490

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4.  Adaptive mutation: general mutagenesis is not a programmed response to stress but results from rare coamplification of dinB with lac.

Authors:  E Susan Slechta; Kim L Bunny; Elisabeth Kugelberg; Eric Kofoid; Dan I Andersson; John R Roth
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-14       Impact factor: 11.205

5.  Role of Escherichia coli DNA polymerase IV in in vivo replication fidelity.

Authors:  Wojciech Kuban; Piotr Jonczyk; Damian Gawel; Karolina Malanowska; Roel M Schaaper; Iwona J Fijalkowska
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

6.  Adaptive point mutation and adaptive amplification pathways in the Escherichia coli Lac system: stress responses producing genetic change.

Authors:  Susan M Rosenberg; P J Hastings
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

7.  Adaptive mutation in Escherichia coli.

Authors:  Patricia L Foster
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

8.  Adaptive mutation: how growth under selection stimulates Lac(+) reversion by increasing target copy number.

Authors:  John R Roth; Dan I Andersson
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

9.  Transcription-induced barriers to supercoil diffusion in the Salmonella typhimurium chromosome.

Authors:  Shuang Deng; Richard A Stein; N Patrick Higgins
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-01       Impact factor: 11.205

10.  Adaptive amplification and point mutation are independent mechanisms: evidence for various stress-inducible mutation mechanisms.

Authors:  P J Hastings; Andrew Slack; Joseph F Petrosino; Susan M Rosenberg
Journal:  PLoS Biol       Date:  2004-11-23       Impact factor: 8.029

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  14 in total

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Journal:  J Bacteriol       Date:  2010-12-03       Impact factor: 3.490

Review 2.  Stress-induced mutagenesis in bacteria.

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Journal:  Crit Rev Biochem Mol Biol       Date:  2007 Sep-Oct       Impact factor: 8.250

Review 3.  Role of polyphosphates in microbial adaptation to extreme environments.

Authors:  Manfredo J Seufferheld; Héctor M Alvarez; Maria E Farias
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4.  Selection and Plasmid Transfer Underlie Adaptive Mutation in Escherichia coli.

Authors:  Sophie Maisnier-Patin; John R Roth
Journal:  Genetics       Date:  2018-09-07       Impact factor: 4.562

5.  Quantum aspects of evolution: a contribution towards evolutionary explorations of genotype networks via quantum walks.

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Journal:  J R Soc Interface       Date:  2020-11-11       Impact factor: 4.118

6.  Interactions and Localization of Escherichia coli Error-Prone DNA Polymerase IV after DNA Damage.

Authors:  Sarita Mallik; Ellen M Popodi; Andrew J Hanson; Patricia L Foster
Journal:  J Bacteriol       Date:  2015-06-22       Impact factor: 3.490

7.  Transposon-mediated activation of the Escherichia coli glpFK operon is inhibited by specific DNA-binding proteins: Implications for stress-induced transposition events.

Authors:  Zhongge Zhang; Milton H Saier
Journal:  Mutat Res       Date:  2016-10-27       Impact factor: 2.433

8.  Impact of a stress-inducible switch to mutagenic repair of DNA breaks on mutation in Escherichia coli.

Authors:  Chandan Shee; Janet L Gibson; Michele C Darrow; Caleb Gonzalez; Susan M Rosenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-01       Impact factor: 11.205

9.  The sigma(E) stress response is required for stress-induced mutation and amplification in Escherichia coli.

Authors:  Janet L Gibson; Mary-Jane Lombardo; Philip C Thornton; Kenneth H Hu; Rodrigo S Galhardo; Bernadette Beadle; Anand Habib; Daniel B Magner; Laura S Frost; Christophe Herman; P J Hastings; Susan M Rosenberg
Journal:  Mol Microbiol       Date:  2010-05-19       Impact factor: 3.501

10.  The Escherichia coli histone-like protein HU has a role in stationary phase adaptive mutation.

Authors:  Ashley B Williams; Patricia L Foster
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

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