Literature DB >> 17197416

Signal transduction pathway of TonB-dependent transporters.

Andrew D Ferguson1, Carlos A Amezcua, Najeeb M Halabi, Yogarany Chelliah, Michael K Rosen, Rama Ranganathan, Johann Deisenhofer.   

Abstract

Transcription of the ferric citrate import system is regulated by ferric citrate binding to the outer membrane transporter FecA. A signal indicating transporter occupancy is relayed across the outer membrane to energy-transducing and regulatory proteins embedded in the cytoplasmic membrane. Because transcriptional activation is not coupled to ferric citrate import, an allosteric mechanism underlies this complex signaling mechanism. Using evolution-based statistical analysis we have identified a sparse but structurally connected network of residues that links distant functional sites in FecA. Functional analyses of these positions confirm their involvement in the mechanism that regulates transcriptional activation in response to ferric citrate binding at the cell surface. This mechanism appears to be conserved and provides the structural basis for the allosteric signaling of TonB-dependent transporters.

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Year:  2006        PMID: 17197416      PMCID: PMC1760641          DOI: 10.1073/pnas.0609887104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Structural basis of gating by the outer membrane transporter FecA.

Authors:  Andrew D Ferguson; Ranjan Chakraborty; Barbara S Smith; Lothar Esser; Dick van der Helm; Johann Deisenhofer
Journal:  Science       Date:  2002-03-01       Impact factor: 47.728

2.  Evolutionarily conserved networks of residues mediate allosteric communication in proteins.

Authors:  Gürol M Süel; Steve W Lockless; Mark A Wall; Rama Ranganathan
Journal:  Nat Struct Biol       Date:  2003-01

3.  Smartnotebook: a semi-automated approach to protein sequential NMR resonance assignments.

Authors:  Carolyn M Slupsky; Robert F Boyko; Valerie K Booth; Brian D Sykes
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

4.  Allosteric determinants in guanine nucleotide-binding proteins.

Authors:  Mark E Hatley; Steve W Lockless; Scott K Gibson; Alfred G Gilman; Rama Ranganathan
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-17       Impact factor: 11.205

5.  Sites of interaction between the FecA and FecR signal transduction proteins of ferric citrate transport in Escherichia coli K-12.

Authors:  Sabine Enz; Heidi Brand; Claudia Orellana; Susanne Mahren; Volkmar Braun
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

6.  Defined inactive FecA derivatives mutated in functional domains of the outer membrane transport and signaling protein of Escherichia coli K-12.

Authors:  Annette Sauter; Volkmar Braun
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

7.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

8.  Structural determinants of allosteric ligand activation in RXR heterodimers.

Authors:  Andrew I Shulman; Christopher Larson; David J Mangelsdorf; Rama Ranganathan
Journal:  Cell       Date:  2004-02-06       Impact factor: 41.582

Review 9.  Metal import through microbial membranes.

Authors:  Andrew D Ferguson; Johann Deisenhofer
Journal:  Cell       Date:  2004-01-09       Impact factor: 41.582

10.  Substrate-induced transmembrane signaling in the cobalamin transporter BtuB.

Authors:  David P Chimento; Arun K Mohanty; Robert J Kadner; Michael C Wiener
Journal:  Nat Struct Biol       Date:  2003-05
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  48 in total

1.  Legionella pneumophila LbtU acts as a novel, TonB-independent receptor for the legiobactin siderophore.

Authors:  Christa H Chatfield; Brendan J Mulhern; Denise M Burnside; Nicholas P Cianciotto
Journal:  J Bacteriol       Date:  2011-01-28       Impact factor: 3.490

2.  Mechanistic Implications of the Unique Structural Features and Dimerization of the Cytoplasmic Domain of the Pseudomonas Sigma Regulator, PupR.

Authors:  Jaime L Jensen; Andrea Balbo; David B Neau; Srinivas Chakravarthy; Huaying Zhao; Sangita C Sinha; Christopher L Colbert
Journal:  Biochemistry       Date:  2015-09-14       Impact factor: 3.162

Review 3.  Signaling mechanisms for activation of extracytoplasmic function (ECF) sigma factors.

Authors:  Benjamin E Brooks; Susan K Buchanan
Journal:  Biochim Biophys Acta       Date:  2007-06-15

4.  An evolution-based strategy for engineering allosteric regulation.

Authors:  David Pincus; Orna Resnekov; Kimberly A Reynolds
Journal:  Phys Biol       Date:  2017-04-28       Impact factor: 2.583

5.  Mechanics of force propagation in TonB-dependent outer membrane transport.

Authors:  James Gumbart; Michael C Wiener; Emad Tajkhorshid
Journal:  Biophys J       Date:  2007-04-20       Impact factor: 4.033

Review 6.  Conversion of cobinamide into adenosylcobamide in bacteria and archaea.

Authors:  Jorge C Escalante-Semerena
Journal:  J Bacteriol       Date:  2007-05-04       Impact factor: 3.490

7.  Predicting the complex structure and functional motions of the outer membrane transporter and signal transducer FecA.

Authors:  Taner Z Sen; Margaret Kloster; Robert L Jernigan; Andrzej Kolinski; Janusz M Bujnicki; Andrzej Kloczkowski
Journal:  Biophys J       Date:  2008-01-04       Impact factor: 4.033

8.  Allosteric cooperativity in protein kinase A.

Authors:  Larry R Masterson; Alessandro Mascioni; Nathaniel J Traaseth; Susan S Taylor; Gianluigi Veglia
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-04       Impact factor: 11.205

9.  Structure-function analysis from the outside in: long-range tertiary contacts in RNA exhibit distinct catalytic roles.

Authors:  Tara L Benz-Moy; Daniel Herschlag
Journal:  Biochemistry       Date:  2011-09-19       Impact factor: 3.162

10.  How hydrophobic molecules traverse the outer membranes of gram-negative bacteria.

Authors:  Michael C Wiener; Peter S Horanyi
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-21       Impact factor: 11.205

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