Literature DB >> 17188683

Phosphorylation by SR kinases regulates the binding of PTB-associated splicing factor (PSF) to the pre-mRNA polypyrimidine tract.

Ching-Jung Huang1, Zhaohua Tang, Ren-Jang Lin, Philip W Tucker.   

Abstract

PSF (PTB-associated splicing factor) is a multi-functional protein that participates in transcription and RNA processing. While phosphorylation of PSF has been shown to be important for some functions, the sites and the kinases involved are not well understood. Although PSF does not contain a typical RS domain, we report here that PSF is phosphorylated in vivo to generate an epitope(s) that can be recognized by a monoclonal antibody specific for phosphorylated RS motifs within SR proteins. PSF can be phosphorylated by human and yeast SR kinases in vivo and in vitro at an isolated RS motif within its N terminus. A functional consequence of SR phosphorylation of PSF is to inhibit its binding to the 3' polypyrimidine tract of pre-mRNA. These results indicate that PSF is a substrate of SR kinases whose phosphorylation regulates its RNA binding capacity and ultimate biological function.

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Year:  2006        PMID: 17188683      PMCID: PMC1847627          DOI: 10.1016/j.febslet.2006.12.015

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  56 in total

1.  The prooncoprotein EWS binds calmodulin and is phosphorylated by protein kinase C through an IQ domain.

Authors:  J C Deloulme; L Prichard; O Delattre; D R Storm
Journal:  J Biol Chem       Date:  1997-10-24       Impact factor: 5.157

Review 2.  The structure and function of proteins involved in mammalian pre-mRNA splicing.

Authors:  A Krämer
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

3.  Phosphorylation of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing.

Authors:  S H Xiao; J L Manley
Journal:  Genes Dev       Date:  1997-02-01       Impact factor: 11.361

4.  Both phosphorylation and dephosphorylation of ASF/SF2 are required for pre-mRNA splicing in vitro.

Authors:  W Cao; S F Jamison; M A Garcia-Blanco
Journal:  RNA       Date:  1997-12       Impact factor: 4.942

5.  Interaction of protein phosphatase type 1 with a splicing factor.

Authors:  K Hirano; F Erdödi; J G Patton; D J Hartshorne
Journal:  FEBS Lett       Date:  1996-07-01       Impact factor: 4.124

6.  Sequence-specific RNA binding by an SR protein requires RS domain phosphorylation: creation of an SRp40-specific splicing enhancer.

Authors:  R Tacke; Y Chen; J L Manley
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-18       Impact factor: 11.205

7.  Coexpression of nuclear receptor partners increases their solubility and biological activities.

Authors:  C Li; J W Schwabe; E Banayo; R M Evans
Journal:  Proc Natl Acad Sci U S A       Date:  1997-03-18       Impact factor: 11.205

8.  Interaction of U2AF65 RS region with pre-mRNA branch point and promotion of base pairing with U2 snRNA [corrected].

Authors:  J Valcárcel; R K Gaur; R Singh; M R Green
Journal:  Science       Date:  1996-09-20       Impact factor: 47.728

9.  The human U5 snRNP-specific 100-kD protein is an RS domain-containing, putative RNA helicase with significant homology to the yeast splicing factor Prp28p.

Authors:  S Teigelkamp; C Mundt; T Achsel; C L Will; R Lührmann
Journal:  RNA       Date:  1997-11       Impact factor: 4.942

10.  The [U4/U6.U5] tri-snRNP-specific 27K protein is a novel SR protein that can be phosphorylated by the snRNP-associated protein kinase.

Authors:  S Fetzer; J Lauber; C L Will; R Lührmann
Journal:  RNA       Date:  1997-04       Impact factor: 4.942

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  10 in total

1.  Multiple checkpoints for the expression of the chloroplast-encoded splicing factor MatK.

Authors:  Stefanie Hertel; Reimo Zoschke; Laura Neumann; Yujiao Qu; Ilka M Axmann; Christian Schmitz-Linneweber
Journal:  Plant Physiol       Date:  2013-10-30       Impact factor: 8.340

2.  Consensus PP1 binding motifs regulate transcriptional corepression and alternative RNA splicing activities of the steroid receptor coregulators, p54nrb and PSF.

Authors:  Liangliang Liu; Ning Xie; Paul Rennie; John R G Challis; Martin Gleave; Stephen J Lye; Xuesen Dong
Journal:  Mol Endocrinol       Date:  2011-05-12

3.  A posttranscriptional mechanism that controls Ptbp1 abundance in the Xenopus epidermis.

Authors:  Agnès Méreau; Vincent Anquetil; Hubert Lerivray; Justine Viet; Claire Schirmer; Yann Audic; Vincent Legagneux; Serge Hardy; Luc Paillard
Journal:  Mol Cell Biol       Date:  2014-12-15       Impact factor: 4.272

Review 4.  Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches.

Authors:  Mo Chen; James L Manley
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-23       Impact factor: 94.444

5.  Structure of the yeast SR protein Npl3 and Interaction with mRNA 3'-end processing signals.

Authors:  Pritilekha Deka; Miriam E Bucheli; Claire Moore; Stephen Buratowski; Gabriele Varani
Journal:  J Mol Biol       Date:  2007-09-16       Impact factor: 5.469

6.  ZRANB2 localizes to supraspliceosomes and influences the alternative splicing of multiple genes in the transcriptome.

Authors:  Yee Hwa J Yang; M Andrea Markus; A Helena Mangs; Oleg Raitskin; Ruth Sperling; Brian J Morris
Journal:  Mol Biol Rep       Date:  2013-05-11       Impact factor: 2.316

7.  The multifunctional protein p54nrb/PSF recruits the exonuclease XRN2 to facilitate pre-mRNA 3' processing and transcription termination.

Authors:  Syuzo Kaneko; Orit Rozenblatt-Rosen; Matthew Meyerson; James L Manley
Journal:  Genes Dev       Date:  2007-07-15       Impact factor: 11.361

Review 8.  PSF: nuclear busy-body or nuclear facilitator?

Authors:  Christopher A Yarosh; Joseph R Iacona; Carol S Lutz; Kristen W Lynch
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-04-01       Impact factor: 9.957

9.  Stk38 Modulates Rbm24 Protein Stability to Regulate Sarcomere Assembly in Cardiomyocytes.

Authors:  Jing Liu; Xu Kong; Yew Mun Lee; Meng Kai Zhang; Li Yan Guo; Yu Lin; Teck Kwang Lim; Qingsong Lin; Xiu Qin Xu
Journal:  Sci Rep       Date:  2017-03-21       Impact factor: 4.379

10.  Unphosphorylated SR-like protein Npl3 stimulates RNA polymerase II elongation.

Authors:  Jessica L Dermody; Jonathan M Dreyfuss; Judit Villén; Babatunde Ogundipe; Steven P Gygi; Peter J Park; Alfred S Ponticelli; Claire L Moore; Stephen Buratowski; Miriam E Bucheli
Journal:  PLoS One       Date:  2008-09-26       Impact factor: 3.240

  10 in total

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