Literature DB >> 17181307

Unified model for the ultrafast decay of pyrimidine nucleobases.

Manuela Merchán1, Remedios González-Luque, Teresa Climent, Luis Serrano-Andrés, Elena Rodríguez, Mar Reguero, Daniel Peláez.   

Abstract

Ultrafast decay processes detected after absorption of UV radiation in gas-phase pyrimidine nucleobases uracil, thymine, and cytosine are ascribed to the barrierless character of the pathway along the low-lying 1(pipi*) hypersurface connecting the Franck-Condon region with an out-of-plane distorted ethene-like conical intersection with the ground state. Longer lifetime decays and low quantum yield emission are on the other hand related to the presence of a 1(pipi*) state planar minimum on the S1 surface and the barriers to access other conical intersections. A unified model for the three systems is established on the basis of accurate multiconfigurational CASPT2 calculations, whereas the effect of the different levels of theory on the results is carefully analyzed.

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Year:  2006        PMID: 17181307     DOI: 10.1021/jp066874a

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  13 in total

1.  Comparative study of the relaxation mechanisms of the excited states of cytosine and isocytosine.

Authors:  Rumyana I Bakalska; Vassil B Delchev
Journal:  J Mol Model       Date:  2012-07-10       Impact factor: 1.810

2.  Computational (DFT and TD DFT) study of the electron structure of the tautomers/conformers of uridine and deoxyuridine and the processes of intramolecular proton transfers.

Authors:  Vassil B Delchev
Journal:  J Mol Model       Date:  2009-10-10       Impact factor: 1.810

3.  Investigation of the mechanisms of photo-induced formation of cyclobutane dimers of cytosine and 2,4-diaminopyrimidine.

Authors:  Pavlina B Kancheva; Vassil B Delchev
Journal:  J Mol Model       Date:  2016-08-29       Impact factor: 1.810

4.  Relaxation mechanisms of UV-photoexcited DNA and RNA nucleobases.

Authors:  Mario Barbatti; Adélia J A Aquino; Jaroslaw J Szymczak; Dana Nachtigallová; Pavel Hobza; Hans Lischka
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-29       Impact factor: 11.205

5.  Non-radiative deactivation of excited cytosine: probing of different DFT functionals and basis sets in solvents with different polarity.

Authors:  T D Cherneva; M M Todorova; R I Bakalska; E Horkel; V B Delchev
Journal:  J Mol Model       Date:  2022-09-09       Impact factor: 2.172

6.  On the origin of life in the zinc world: 1. Photosynthesizing, porous edifices built of hydrothermally precipitated zinc sulfide as cradles of life on Earth.

Authors:  Armen Y Mulkidjanian
Journal:  Biol Direct       Date:  2009-08-24       Impact factor: 4.540

7.  Photophysical properties of pyrrolocytosine, a cytosine fluorescent base analogue.

Authors:  Quynh L Nguyen; Vincent A Spata; Spiridoula Matsika
Journal:  Phys Chem Chem Phys       Date:  2016-07-27       Impact factor: 3.676

8.  Deciphering the photochemical mechanisms describing the UV-induced processes occurring in solvated guanine monophosphate.

Authors:  Salvatore F Altavilla; Javier Segarra-Martí; Artur Nenov; Irene Conti; Ivan Rivalta; Marco Garavelli
Journal:  Front Chem       Date:  2015-04-20       Impact factor: 5.221

9.  Multiple Decay Mechanisms and 2D-UV Spectroscopic Fingerprints of Singlet Excited Solvated Adenine-Uracil Monophosphate.

Authors:  Quansong Li; Angelo Giussani; Javier Segarra-Martí; Artur Nenov; Ivan Rivalta; Alexander A Voityuk; Shaul Mukamel; Daniel Roca-Sanjuán; Marco Garavelli; Lluís Blancafort
Journal:  Chemistry       Date:  2016-04-26       Impact factor: 5.236

10.  Ultrafast intersystem crossing dynamics in uracil unravelled by ab initio molecular dynamics.

Authors:  Martin Richter; Sebastian Mai; Philipp Marquetand; Leticia González
Journal:  Phys Chem Chem Phys       Date:  2014-11-28       Impact factor: 3.676

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