Literature DB >> 17163673

Act globally, think locally: systems biology addresses the PDZ domain.

Mark R Spaller1.   

Abstract

Interaction networks, cartography and mapping, wiring and circuitry, whichever metaphor is invoked, the cardinal questions regarding cellular proteins are the same: What are they? How much is there? What do they do, and to whom do they do it? One of the more recent proteomics tools to pursue these lines of inquiry is the protein microarray, and a current report has unleashed this formidable technique upon a target of considerable biological interest, the PDZ domain family of signaling molecules.

Mesh:

Year:  2006        PMID: 17163673     DOI: 10.1021/cb600191y

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  14 in total

Review 1.  Signaling mechanisms for activation of extracytoplasmic function (ECF) sigma factors.

Authors:  Benjamin E Brooks; Susan K Buchanan
Journal:  Biochim Biophys Acta       Date:  2007-06-15

Review 2.  Emerging theme: cellular PDZ proteins as common targets of pathogenic viruses.

Authors:  Ronald T Javier; Andrew P Rice
Journal:  J Virol       Date:  2011-07-20       Impact factor: 5.103

3.  Promiscuous binding at the crossroads of numerous cancer pathways: insight from the binding of glutaminase interacting protein with glutaminase L.

Authors:  David L Zoetewey; Mohiuddin Ovee; Monimoy Banerjee; Rajagopalan Bhaskaran; Smita Mohanty
Journal:  Biochemistry       Date:  2011-04-06       Impact factor: 3.162

Review 4.  Biology of human papillomavirus-related oropharyngeal cancer.

Authors:  Jason D Howard; Christine H Chung
Journal:  Semin Radiat Oncol       Date:  2012-07       Impact factor: 5.934

5.  The ESEV PDZ-binding motif of the avian influenza A virus NS1 protein protects infected cells from apoptosis by directly targeting Scribble.

Authors:  Hongbing Liu; Lisa Golebiewski; Eugene C Dow; Robert M Krug; Ronald T Javier; Andrew P Rice
Journal:  J Virol       Date:  2010-08-11       Impact factor: 5.103

6.  Identification of brain-specific angiogenesis inhibitor 2 as an interaction partner of glutaminase interacting protein.

Authors:  Sevil Zencir; Mohiuddin Ovee; Melanie J Dobson; Monimoy Banerjee; Zeki Topcu; Smita Mohanty
Journal:  Biochem Biophys Res Commun       Date:  2011-07-20       Impact factor: 3.575

7.  PDZ domains and their binding partners: structure, specificity, and modification.

Authors:  Ho-Jin Lee; Jie J Zheng
Journal:  Cell Commun Signal       Date:  2010-05-28       Impact factor: 5.712

8.  Targeting GIPC/synectin in pancreatic cancer inhibits tumor growth.

Authors:  Michael H Muders; Pawan K Vohra; Shamit K Dutta; Enfeng Wang; Yasuhiro Ikeda; Ling Wang; D Gomika Udugamasooriya; Adnan Memic; Chamila N Rupasinghe; Chamila N Rupashinghe; Gustavo B Baretton; Daniela E Aust; Silke Langer; Kaustubh Datta; Michael Simons; Mark R Spaller; Debabrata Mukhopadhyay
Journal:  Clin Cancer Res       Date:  2009-06-09       Impact factor: 12.531

9.  Simultaneous prediction of binding free energy and specificity for PDZ domain-peptide interactions.

Authors:  Joseph J Crivelli; Gordon Lemmon; Kristian W Kaufmann; Jens Meiler
Journal:  J Comput Aided Mol Des       Date:  2013-12-05       Impact factor: 3.686

10.  Binding free energy landscape of domain-peptide interactions.

Authors:  Iskra Staneva; Stefan Wallin
Journal:  PLoS Comput Biol       Date:  2011-08-18       Impact factor: 4.475

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