Literature DB >> 17145932

Selection of thioaptamers for diagnostics and therapeutics.

Xianbin Yang1, He Wang, David W C Beasley, David E Volk, Xu Zhao, Bruce A Luxon, Lee O Lomas, Norbert K Herzog, Judith F Aronson, Alan D T Barrett, James F Leary, David G Gorenstein.   

Abstract

Thioaptamers offer advantages over normal phosphate ester backbone aptamers due to their enhanced affinity, specificity, and higher stability, largely due to the properties of the sulfur backbone modifications. Over the past several years, in vitro thioaptamer selection and bead-based thioaptamer selection techniques have been developed in our laboratory. Furthermore, several thioaptamers targeting specific proteins such as transcription factor NF-kappaB and AP-1 proteins have been identified. Selected thioaptamers have been shown diagnostic promise in proteome screens. Moreover, some promising thioaptamers have been shown in preliminary animal therapeutic dosing to increase survival in animal models of infection with West Nile virus.

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Year:  2006        PMID: 17145932     DOI: 10.1196/annals.1348.065

Source DB:  PubMed          Journal:  Ann N Y Acad Sci        ISSN: 0077-8923            Impact factor:   5.691


  14 in total

1.  Strategies for the discovery of therapeutic aptamers.

Authors:  Xianbin Yang; Na Li; David G Gorenstein
Journal:  Expert Opin Drug Discov       Date:  2011-01       Impact factor: 6.098

2.  Thioaptamers targeting dengue virus type-2 envelope protein domain III.

Authors:  Sai Hari A Gandham; David E Volk; Ganesh L R Lokesh; Muniasamy Neerathilingam; David G Gorenstein
Journal:  Biochem Biophys Res Commun       Date:  2014-09-26       Impact factor: 3.575

3.  Selection of PD1/PD-L1 X-Aptamers.

Authors:  Hongyu Wang; Curtis H Lam; Xin Li; Derek L West; Xianbin Yang
Journal:  Biochimie       Date:  2017-09-11       Impact factor: 4.079

4.  Solid-Phase Synthesis of RNA Analogs Containing Phosphorodithioate Linkages.

Authors:  Xianbin Yang
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2017-09-18

5.  Crystal structures of thrombin in complex with chemically modified thrombin DNA aptamers reveal the origins of enhanced affinity.

Authors:  Rafal Dolot; Curtis H Lam; Malgorzata Sierant; Qiang Zhao; Feng-Wu Liu; Barbara Nawrot; Martin Egli; Xianbin Yang
Journal:  Nucleic Acids Res       Date:  2018-05-18       Impact factor: 16.971

6.  Selection of a novel DNA thioaptamer against HER2 structure.

Authors:  Y Hu; J Duan; B Cao; L Zhang; X Lu; F Wang; F Yao; Z Zhu; W Yuan; C Wang; X-D Yang
Journal:  Clin Transl Oncol       Date:  2015-05-29       Impact factor: 3.405

7.  Morph-X-Select: Morphology-based tissue aptamer selection for ovarian cancer biomarker discovery.

Authors:  Hongyu Wang; Xin Li; David E Volk; Ganesh L-R Lokesh; Miguel-Angel Elizondo-Riojas; Li Li; Alpa M Nick; Anil K Sood; Kevin P Rosenblatt; David G Gorenstein
Journal:  Biotechniques       Date:  2016-11-01       Impact factor: 1.993

8.  Comparing human pancreatic cell secretomes by in vitro aptamer selection identifies cyclophilin B as a candidate pancreatic cancer biomarker.

Authors:  Partha Ray; Kristy L Rialon-Guevara; Emanuela Veras; Bruce A Sullenger; Rebekah R White
Journal:  J Clin Invest       Date:  2012-04-09       Impact factor: 14.808

Review 9.  Aptamers and the next generation of diagnostic reagents.

Authors:  Varatharasa Thiviyanathan; David G Gorenstein
Journal:  Proteomics Clin Appl       Date:  2012-12       Impact factor: 3.494

10.  Identification of thioaptamer ligand against E-selectin: potential application for inflamed vasculature targeting.

Authors:  Aman P Mann; Anoma Somasunderam; René Nieves-Alicea; Xin Li; Austin Hu; Anil K Sood; Mauro Ferrari; David G Gorenstein; Takemi Tanaka
Journal:  PLoS One       Date:  2010-09-30       Impact factor: 3.240

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