Literature DB >> 17123111

Wheat VIN3-like PHD finger genes are up-regulated by vernalization.

Daolin Fu1, Mignon Dunbar, Jorge Dubcovsky.   

Abstract

The term 'vernalization' describes the acceleration of the transition between the vegetative and reproductive stages after exposing plants to an extended period of low temperature. In Arabidopsis, vernalization promotes flowering by silencing the flowering repressor gene FLOWERING LOCUS C (FLC). Mitotically stable repression of FLC is the result of chromatin modifications mediated by the Vernalization-INsensitive 3 (VIN3) and VIN3-Like (VIL) proteins. In this study, we identified and characterized three VIL genes in diploid wheat (Triticum monococcum L.), named TmVIL1, TmVIL2, and TmVIL3. Similar to Arabidopsis VIN3, all three wheat VIL proteins carry three conserved domains including a plant homeodomain finger motif (PHD), a fibronectin type III domain (FNIII), and a VIN3 interacting domain (VID). Genetic mapping placed TmVIL1, TmVIL2, and TmVIL3 loci in the centromeric regions of chromosome 5, 6, and 1, respectively. The chromosome location of TmVIL1 is close to that of the vernalization gene VRN-D5, but more precise mapping information is required to validate this relationship. Transcription of the wheat VIL genes was up-regulated by vernalization, with a peak after 4-6 weeks of cold treatment. When transferred back to warm conditions, transcript levels of the wheat VIL genes returned to pre-vernalization levels. In addition, the transcript levels of wheat VIL genes are affected by photoperiod. This study indicates that wheat VIL genes have retained a similar structure and transcriptional regulation as their Arabidopsis VIN3/VIL homologues, suggesting that they might have retained some of their functions.

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Year:  2006        PMID: 17123111     DOI: 10.1007/s00438-006-0189-6

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  42 in total

1.  Construction and characterization of a bacterial artificial chromosome (BAC) library for the A genome of wheat.

Authors:  D Lijavetzky; G Muzzi; T Wicker; B Keller; R Wing; J Dubcovsky
Journal:  Genome       Date:  1999-12       Impact factor: 2.166

2.  Multiple roles of Arabidopsis VRN1 in vernalization and flowering time control.

Authors:  Yaron Y Levy; Stéphane Mesnage; Joshua S Mylne; Anthony R Gendall; Caroline Dean
Journal:  Science       Date:  2002-07-12       Impact factor: 47.728

3.  GENETIC CONTROL OF FLOWERING TIME IN ARABIDOPSIS.

Authors:  Maarten Koornneef; Carlos Alonso-Blanco; Anton J. M. Peeters; Wim Soppe
Journal:  Annu Rev Plant Physiol Plant Mol Biol       Date:  1998-06

Review 4.  Fibronectin at a glance.

Authors:  Roumen Pankov; Kenneth M Yamada
Journal:  J Cell Sci       Date:  2002-10-15       Impact factor: 5.285

5.  The C-type lectin domains of lecticans, a family of aggregating chondroitin sulfate proteoglycans, bind tenascin-R by protein-protein interactions independent of carbohydrate moiety.

Authors:  A Aspberg; R Miura; S Bourdoulous; M Shimonaka; D Heinegârd; M Schachner; E Ruoslahti; Y Yamaguchi
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

6.  Mimicking cellular sorting improves prediction of subcellular localization.

Authors:  Rajesh Nair; Burkhard Rost
Journal:  J Mol Biol       Date:  2005-04-22       Impact factor: 5.469

7.  Isolation and mapping of microsatellite markers specific for the D genome of bread wheat.

Authors:  E Pestsova; M W Ganal; M S Röder
Journal:  Genome       Date:  2000-08       Impact factor: 2.166

8.  The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation.

Authors:  C C Sheldon; J E Burn; P P Perez; J Metzger; J A Edwards; W J Peacock; E S Dennis
Journal:  Plant Cell       Date:  1999-03       Impact factor: 11.277

9.  The wheat VRN2 gene is a flowering repressor down-regulated by vernalization.

Authors:  Liuling Yan; Artem Loukoianov; Ann Blechl; Gabriela Tranquilli; Wusirika Ramakrishna; Phillip SanMiguel; Jeffrey L Bennetzen; Viviana Echenique; Jorge Dubcovsky
Journal:  Science       Date:  2004-03-12       Impact factor: 47.728

10.  Effect of photoperiod on the regulation of wheat vernalization genes VRN1 and VRN2.

Authors:  Jorge Dubcovsky; Artem Loukoianov; Daolin Fu; Miroslav Valarik; Alexandra Sanchez; Liuling Yan
Journal:  Plant Mol Biol       Date:  2006-03       Impact factor: 4.076

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  23 in total

Review 1.  PHDs govern plant development.

Authors:  Alfonso Mouriz; Leticia López-González; Jose A Jarillo; Manuel Piñeiro
Journal:  Plant Signal Behav       Date:  2015

2.  Expression of vernalization responsive genes in wheat is associated with histone H3 trimethylation.

Authors:  Amadou Oury Diallo; Mohamed Ali Ali-Benali; Mohamed Badawi; Mario Houde; Fathey Sarhan
Journal:  Mol Genet Genomics       Date:  2012-06-10       Impact factor: 3.291

3.  A PHD-polycomb repressive complex 2 triggers the epigenetic silencing of FLC during vernalization.

Authors:  Filomena De Lucia; Pedro Crevillen; Alexandra M E Jones; Thomas Greb; Caroline Dean
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-14       Impact factor: 11.205

4.  Comparative genomics of flowering time pathways using Brachypodium distachyon as a model for the temperate grasses.

Authors:  Janet A Higgins; Paul C Bailey; David A Laurie
Journal:  PLoS One       Date:  2010-04-19       Impact factor: 3.240

5.  The Role of VIN3-LIKE Genes in Environmentally Induced Epigenetic Regulation of Flowering.

Authors:  Sibum Sung; Robert J Schmitz; Richard Amasino
Journal:  Plant Signal Behav       Date:  2007-03

6.  Vrn-D4 is a vernalization gene located on the centromeric region of chromosome 5D in hexaploid wheat.

Authors:  Tetsuya Yoshida; Hidetaka Nishida; Jie Zhu; Rebecca Nitcher; Assaf Distelfeld; Yukari Akashi; Kenji Kato; Jorge Dubcovsky
Journal:  Theor Appl Genet       Date:  2009-10-22       Impact factor: 5.699

7.  OsVIL1 controls flowering time in rice by suppressing OsLF under short days and by inducing Ghd7 under long days.

Authors:  Hee Joong Jeong; Jungil Yang; Lae-Hyeon Cho; Gynheung An
Journal:  Plant Cell Rep       Date:  2016-01-21       Impact factor: 4.570

8.  Vernalization-induced flowering in cereals is associated with changes in histone methylation at the VERNALIZATION1 gene.

Authors:  Sandra N Oliver; E Jean Finnegan; Elizabeth S Dennis; W James Peacock; Ben Trevaskis
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-04       Impact factor: 11.205

Review 9.  The molecular biology of seasonal flowering-responses in Arabidopsis and the cereals.

Authors:  Aaron Greenup; W James Peacock; Elizabeth S Dennis; Ben Trevaskis
Journal:  Ann Bot       Date:  2009-03-21       Impact factor: 4.357

10.  The influence of vernalization and daylength on expression of flowering-time genes in the shoot apex and leaves of barley (Hordeum vulgare).

Authors:  Shahryar Sasani; Megan N Hemming; Sandra N Oliver; Aaron Greenup; Reza Tavakkol-Afshari; Siroos Mahfoozi; Kazem Poustini; Hamid-Reza Sharifi; Elizabeth S Dennis; W James Peacock; Ben Trevaskis
Journal:  J Exp Bot       Date:  2009-04-08       Impact factor: 6.992

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