Literature DB >> 17115698

Trapped conformational states of semiquinone (D+*QB-*) formed by B-branch electron transfer at low temperature in Rhodobacter sphaeroides reaction centers.

M L Paddock1, M Flores, R Isaacson, C Chang, E C Abresch, P Selvaduray, M Y Okamura.   

Abstract

The reaction center (RC) from Rhodobacter sphaeroides captures light energy by electron transfer between quinones QA and QB, involving a conformational gating step. In this work, conformational states of D+*QB-* were trapped (80 K) and studied using EPR spectroscopy in native and mutant RCs that lack QA in which QB was reduced by the bacteriopheophytin along the B-branch. In mutant RCs frozen in the dark, a light induced EPR signal due to D+*QB-* formed in 30% of the sample with low quantum yield (0.2%-20%) and decayed in 6 s. A small signal with similar characteristics was also observed in native RCs. In contrast, the EPR signal due to D+*QB-* in mutant RCs illuminated while freezing formed in approximately 95% of the sample did not decay (tau >107 s) at 80 K (also observed in the native RC). In all samples, the observed g-values were the same (g = 2.0026), indicating that all active QB-*'s were located in a proximal conformation coupled with the nonheme Fe2+. We propose that before electron transfer at 80 K, the majority (approximately 70%) of QB, structurally located in the distal site, was not stably reducible, whereas the minority (approximately 30%) of active configurations was in the proximal site. The large difference in the lifetimes of the unrelaxed and relaxed D+*QB-* states is attributed to the relaxation of protein residues and internal water molecules that stabilize D+*QB-*. These results demonstrate energetically significant conformational changes involved in stabilizing the D+*QB-* state. The unrelaxed and relaxed states can be considered to be the initial and final states along the reaction coordinate for conformationally gated electron transfer.

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Year:  2006        PMID: 17115698      PMCID: PMC2259235          DOI: 10.1021/bi060854h

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  55 in total

1.  Trapping conformational intermediate states in the reaction center protein from photosynthetic bacteria.

Authors:  Q Xu; M R Gunner
Journal:  Biochemistry       Date:  2001-03-13       Impact factor: 3.162

Review 2.  Mechanisms for regulating electron transfer in multi-centre redox proteins.

Authors:  R E Sharp; S K Chapman
Journal:  Biochim Biophys Acta       Date:  1999-07-13

3.  B-side charge separation in bacterial photosynthetic reaction centers: nanosecond time scale electron transfer from HB- to QB.

Authors:  Christine Kirmaier; Philip D Laible; Deborah K Hanson; Dewey Holten
Journal:  Biochemistry       Date:  2003-02-25       Impact factor: 3.162

4.  Absence of large-scale displacement of quinone QB in bacterial photosynthetic reaction centers.

Authors:  Jacques Breton
Journal:  Biochemistry       Date:  2004-03-30       Impact factor: 3.162

5.  Conformational gating of the electron transfer reaction QA-.QB --> QAQB-. in bacterial reaction centers of Rhodobacter sphaeroides determined by a driving force assay.

Authors:  M S Graige; G Feher; M Y Okamura
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

6.  Kinetic phases in the electron transfer from P+QA-QB to P+QAQB- and the associated processes in Rhodobacter sphaeroides R-26 reaction centers.

Authors:  J Li; D Gilroy; D M Tiede; M R Gunner
Journal:  Biochemistry       Date:  1998-03-03       Impact factor: 3.162

7.  Charge separation in a reaction center incorporating bacteriochlorophyll for photoactive bacteriopheophytin.

Authors:  C Kirmaier; D Gaul; R DeBey; D Holten; C C Schenck
Journal:  Science       Date:  1991-02-22       Impact factor: 47.728

8.  Electron transfer kinetics in photosynthetic reaction centers embedded in polyvinyl alcohol films.

Authors:  Francesco Francia; Lisa Giachini; Gerardo Palazzo; Antonia Mallardi; Federico Boscherini; Giovanni Venturoli
Journal:  Bioelectrochemistry       Date:  2004-06       Impact factor: 5.373

9.  X-Ray structure determination of three mutants of the bacterial photosynthetic reaction centers from Rb. sphaeroides; altered proton transfer pathways.

Authors:  Qiang Xu; Herbert L Axelrod; Edward C Abresch; Mark L Paddock; Melvin Y Okamura; George Feher
Journal:  Structure       Date:  2004-04       Impact factor: 5.006

10.  Variation of Ser-L223 hydrogen bonding with the QB redox state in reaction centers from Rhodobacter sphaeroides.

Authors:  Hiroshi Ishikita; Ernst-Walter Knapp
Journal:  J Am Chem Soc       Date:  2004-06-30       Impact factor: 15.419

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  6 in total

1.  ENDOR spectroscopy reveals light induced movement of the H-bond from Ser-L223 upon forming the semiquinone (Q(B)(-)(*)) in reaction centers from Rhodobacter sphaeroides.

Authors:  M L Paddock; M Flores; R Isaacson; C Chang; E C Abresch; M Y Okamura
Journal:  Biochemistry       Date:  2007-06-23       Impact factor: 3.162

2.  Light induced EPR spectra of reaction centers from Rhodobacter sphaeroides at 80K: Evidence for reduction of Q(B) by B-branch electron transfer in native reaction centers.

Authors:  M L Paddock; R A Isaacson; E C Abresch; M Y Okamura
Journal:  Appl Magn Reson       Date:  2007       Impact factor: 0.831

3.  Photosynthetic diode: electron transport rectification by wetting the quinone cofactor.

Authors:  Daniel R Martin; Dmitry V Matyushov
Journal:  Phys Chem Chem Phys       Date:  2015-07-14       Impact factor: 3.676

4.  Effects of the measuring light on the photochemistry of the bacterial photosynthetic reaction center from Rhodobacter sphaeroides.

Authors:  Ivan Husu; Mauro Giustini; Giuseppe Colafemmina; Gerardo Palazzo; Antonia Mallardi
Journal:  Photosynth Res       Date:  2011-07-23       Impact factor: 3.573

5.  Pulse Q-band EPR and ENDOR spectroscopies of the photochemically generated monoprotonated benzosemiquinone radical in frozen alcoholic solution.

Authors:  Marco Flores; Melvin Y Okamura; Jens Niklas; Maria-Eirini Pandelia; Wolfgang Lubitz
Journal:  J Phys Chem B       Date:  2012-07-20       Impact factor: 2.991

6.  EPR and ENDOR Investigation of Rhodosemiquinone in Bacterial Reaction Centers Formed by B-Branch Electron Transfer.

Authors:  M L Paddock; M Flores; R Isaacson; J N Shepherd; M Y Okamura
Journal:  Appl Magn Reson       Date:  2010-01-01       Impact factor: 0.831

  6 in total

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