Literature DB >> 17113816

Sequencing single molecules of DNA.

Hagan Bayley1.   

Abstract

In 2004, the NIH set a remarkable challenge: the 1000 dollars genome. Roughly speaking, success would provide, by 2015, the ability to sequence the complete genome of an individual human, quickly and at an accessible price. An intermediate goal of a 100,000 dollars genome was set for 2010. While the cost of Sanger sequencing has dropped dramatically over the past two decades, it is unlikely that the 100,000 dollars genome will be achieved by this means. New massively parallel technologies will push the cost of sequencing towards this mark, but it is doubtful whether these efforts will match the 1000 dollars goal. The best bets for ultrarapid, low-cost sequencing are single-molecule approaches.

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Year:  2006        PMID: 17113816     DOI: 10.1016/j.cbpa.2006.10.040

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  47 in total

1.  Identification of epigenetic DNA modifications with a protein nanopore.

Authors:  Emma V B Wallace; David Stoddart; Andrew J Heron; Ellina Mikhailova; Giovanni Maglia; Timothy J Donohoe; Hagan Bayley
Journal:  Chem Commun (Camb)       Date:  2010-10-06       Impact factor: 6.222

Review 2.  Nanopore analysis: An emerging technique for studying the folding and misfolding of proteins.

Authors:  Claudia Madampage; Omid Tavassoly; Chris Christensen; Meena Kumari; Jeremy S Lee
Journal:  Prion       Date:  2012-04-01       Impact factor: 3.931

3.  On the Feasibility of Using the Intrinsic Fluorescence of Nucleotides for DNA Sequencing.

Authors:  Mustafa H Chowdhury; Krishanu Ray; Michael L Johnson; Stephen K Gray; James Pond; Joseph R Lakowicz
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2010-04-29       Impact factor: 4.126

4.  Deciphering ionic current signatures of DNA transport through a nanopore.

Authors:  Aleksei Aksimentiev
Journal:  Nanoscale       Date:  2010-02-02       Impact factor: 7.790

Review 5.  Single molecule sensing by nanopores and nanopore devices.

Authors:  Li-Qun Gu; Ji Wook Shim
Journal:  Analyst       Date:  2009-12-22       Impact factor: 4.616

6.  Detection of DNA sequences using an alternating electric field in a nanopore capacitor.

Authors:  Grigori Sigalov; Jeffrey Comer; Gregory Timp; Aleksei Aksimentiev
Journal:  Nano Lett       Date:  2007-12-11       Impact factor: 11.189

7.  Exploring transmembrane transport through alpha-hemolysin with grid-steered molecular dynamics.

Authors:  David B Wells; Volha Abramkina; Aleksei Aksimentiev
Journal:  J Chem Phys       Date:  2007-09-28       Impact factor: 3.488

8.  A single-molecule nanopore device detects DNA polymerase activity with single-nucleotide resolution.

Authors:  Scott L Cockroft; John Chu; Manuel Amorin; M Reza Ghadiri
Journal:  J Am Chem Soc       Date:  2008-01-01       Impact factor: 15.419

9.  Coamplification at lower denaturation temperature-PCR increases mutation-detection selectivity of TaqMan-based real-time PCR.

Authors:  Jin Li; Lilin Wang; Pasi A Jänne; G Mike Makrigiorgos
Journal:  Clin Chem       Date:  2009-02-20       Impact factor: 8.327

Review 10.  Detection of miRNAs with a nanopore single-molecule counter.

Authors:  Li-Qun Gu; Meni Wanunu; Michael X Wang; Larry McReynolds; Yong Wang
Journal:  Expert Rev Mol Diagn       Date:  2012-07       Impact factor: 5.225

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