Literature DB >> 22845478

Detection of miRNAs with a nanopore single-molecule counter.

Li-Qun Gu1, Meni Wanunu, Michael X Wang, Larry McReynolds, Yong Wang.   

Abstract

miRNAs are short noncoding RNA molecules that are important in regulating gene expression. Due to the correlation of their expression levels and various diseases, miRNAs are being investigated as potential biomarkers for molecular diagnostics. The fast-growing miRNA exploration demands rapid, accurate, low-cost miRNA detection technologies. This article will focus on two platforms of nanopore single-molecule approach that can quantitatively measure miRNA levels in samples from tissue and cancer patient plasma. Both nanopore methods are sensitive and specific, and do not need labeling, enzymatic reaction or amplification. In the next 5 years, the nanopore-based miRNA techniques will be improved and validated for noninvasive and early diagnosis of diseases.

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Year:  2012        PMID: 22845478      PMCID: PMC3500609          DOI: 10.1586/erm.12.58

Source DB:  PubMed          Journal:  Expert Rev Mol Diagn        ISSN: 1473-7159            Impact factor:   5.225


  87 in total

1.  Optical recognition of converted DNA nucleotides for single-molecule DNA sequencing using nanopore arrays.

Authors:  Ben McNally; Alon Singer; Zhiliang Yu; Yingjie Sun; Zhiping Weng; Amit Meller
Journal:  Nano Lett       Date:  2010-06-09       Impact factor: 11.189

Review 2.  Stochastic nanopore sensors for the detection of terrorist agents: current status and challenges.

Authors:  Aihua Liu; Qitao Zhao; Xiyun Guan
Journal:  Anal Chim Acta       Date:  2010-08-06       Impact factor: 6.558

Review 3.  Single molecule sensing by nanopores and nanopore devices.

Authors:  Li-Qun Gu; Ji Wook Shim
Journal:  Analyst       Date:  2009-12-22       Impact factor: 4.616

4.  Secretory mechanisms and intercellular transfer of microRNAs in living cells.

Authors:  Nobuyoshi Kosaka; Haruhisa Iguchi; Yusuke Yoshioka; Fumitaka Takeshita; Yasushi Matsuki; Takahiro Ochiya
Journal:  J Biol Chem       Date:  2010-03-30       Impact factor: 5.157

Review 5.  Biological nanopores for single-molecule biophysics.

Authors:  Long Ma; Scott L Cockroft
Journal:  Chembiochem       Date:  2010-01-04       Impact factor: 3.164

6.  Evaluation of microRNA expression profiles that may predict recurrence of localized stage I non-small cell lung cancer after surgical resection.

Authors:  Santosh K Patnaik; Eric Kannisto; Steen Knudsen; Sai Yendamuri
Journal:  Cancer Res       Date:  2009-12-22       Impact factor: 12.701

7.  Protein mediated miRNA detection and siRNA enrichment using p19.

Authors:  Jingmin Jin; Melissa Cid; Catherine B Poole; Larry A McReynolds
Journal:  Biotechniques       Date:  2010-06       Impact factor: 1.993

Review 8.  MicroRNA control of signal transduction.

Authors:  Masafumi Inui; Graziano Martello; Stefano Piccolo
Journal:  Nat Rev Mol Cell Biol       Date:  2010-03-10       Impact factor: 94.444

9.  Nanopore based sequence specific detection of duplex DNA for genomic profiling.

Authors:  Alon Singer; Meni Wanunu; Will Morrison; Heiko Kuhn; Maxim Frank-Kamenetskii; Amit Meller
Journal:  Nano Lett       Date:  2010-02-10       Impact factor: 11.189

10.  Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient.

Authors:  Meni Wanunu; Will Morrison; Yitzhak Rabin; Alexander Y Grosberg; Amit Meller
Journal:  Nat Nanotechnol       Date:  2009-12-20       Impact factor: 39.213

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  12 in total

1.  Solid-state nanopore localization by controlled breakdown of selectively thinned membranes.

Authors:  Autumn T Carlsen; Kyle Briggs; Adam R Hall; Vincent Tabard-Cossa
Journal:  Nanotechnology       Date:  2017-01-03       Impact factor: 3.874

Review 2.  An overview of microRNAs.

Authors:  Scott M Hammond
Journal:  Adv Drug Deliv Rev       Date:  2015-05-12       Impact factor: 15.470

Review 3.  Developing epigenetic diagnostics and therapeutics for brain disorders.

Authors:  Irfan A Qureshi; Mark F Mehler
Journal:  Trends Mol Med       Date:  2013-10-18       Impact factor: 11.951

4.  Accuracy of microRNA discovery pipelines in non-model organisms using closely related species genomes.

Authors:  Kayvan Etebari; Sassan Asgari
Journal:  PLoS One       Date:  2014-01-03       Impact factor: 3.240

Review 5.  The Non-Coding Transcriptome of Prostate Cancer: Implications for Clinical Practice.

Authors:  Irene V Bijnsdorp; Martin E van Royen; Gerald W Verhaegh; Elena S Martens-Uzunova
Journal:  Mol Diagn Ther       Date:  2017-08       Impact factor: 4.074

Review 6.  Nanotechnology based approaches for detection and delivery of microRNA in healthcare and crop protection.

Authors:  Vrantika Chaudhary; Sumit Jangra; Neelam R Yadav
Journal:  J Nanobiotechnology       Date:  2018-04-13       Impact factor: 10.435

7.  Continuous biomarker monitoring by particle mobility sensing with single molecule resolution.

Authors:  Emiel W A Visser; Junhong Yan; Leo J van IJzendoorn; Menno W J Prins
Journal:  Nat Commun       Date:  2018-06-29       Impact factor: 14.919

Review 8.  Clinical Application of Circulating MicroRNAs in Parkinson's Disease: The Challenges and Opportunities as Diagnostic Biomarker.

Authors:  Palaniswamy Ramaswamy; Ravi Yadav; Pramod Kumar Pal; Rita Christopher
Journal:  Ann Indian Acad Neurol       Date:  2020-01-21       Impact factor: 1.383

9.  Non-Coding RNAs: Functional Aspects and Diagnostic Utility in Oncology.

Authors:  Taiho Kim; Armin Reitmair
Journal:  Int J Mol Sci       Date:  2013-03-01       Impact factor: 5.923

Review 10.  Third-Generation Sequencing: The Spearhead towards the Radical Transformation of Modern Genomics.

Authors:  Konstantina Athanasopoulou; Michaela A Boti; Panagiotis G Adamopoulos; Paraskevi C Skourou; Andreas Scorilas
Journal:  Life (Basel)       Date:  2021-12-26
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