Literature DB >> 17111268

Flexible ex vivo phantoms for validation of diffusion tensor tractography on a clinical scanner.

Makoto Watanabe1, Shigeki Aoki, Yoshitaka Masutani, Osamu Abe, Naoto Hayashi, Tomohiko Masumoto, Harushi Mori, Hiroyuki Kabasawa, Kuni Ohtomo.   

Abstract

PURPOSE: The aim of this study was to develop ex vivo diffusion tensor (DT) flexible phantoms.
MATERIALS AND METHODS: Materials were bundles of textile threads of cotton, monofilament nylon, rayon, and polyester bunched with spiral wrapping bands and immersed in water. DT images were acquired on a 1.5-Tesla clinical magnetic resonance scanner using echo planar imaging sequences with 15 motion probing gradient directions. DT tractography with seeding and a line-tracking method was carried out by software originally developed on a PC-based workstation.
RESULTS: We observed relatively high fractional anisotropy on the polyester phantom and were able to reconstruct tractography. Straight tracts along the bundle were displayed when it was arranged linearly. It was easy to bend arcuately or bifurcate at one end; and tracts followed the course of the bundle, whether it was curved or branched and had good agreement with direct visual observation. Tractography with the other fibers was unsuccessful.
CONCLUSION: The polyester phantom revealed a diffusion anisotropic structure according to its shape and would be utilizable repeatedly under the same conditions, differently from living central neuronal system. It would be useful to validate DT sequences and to optimize an algorithm or parameters of DT tractography software. Additionally, the flexibility of the phantom would enable us to model human axonal projections.

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Year:  2006        PMID: 17111268     DOI: 10.1007/s11604-006-0076-4

Source DB:  PubMed          Journal:  Radiat Med        ISSN: 0288-2043


  17 in total

1.  Magnetic resonance microimaging of intraaxonal water diffusion in live excised lamprey spinal cord.

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-25       Impact factor: 11.205

Review 2.  MR diffusion tensor imaging: recent advance and new techniques for diffusion tensor visualization.

Authors:  Yoshitaka Masutani; Shigeki Aoki; Osamu Abe; Naoto Hayashi; Kuni Otomo
Journal:  Eur J Radiol       Date:  2003-04       Impact factor: 3.528

3.  Orientational diffusion reflects fiber structure within a voxel.

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4.  Diffusion tensor imaging of in vivo and excised rat spinal cord at 7 T with an icosahedral encoding scheme.

Authors:  Saaussan Madi; Khader M Hasan; Ponnada A Narayana
Journal:  Magn Reson Med       Date:  2005-01       Impact factor: 4.668

5.  Quantitative evaluation of the pyramidal tract segmented by diffusion tensor tractography: feasibility study in patients with amyotrophic lateral sclerosis.

Authors:  Shigeki Aoki; Nobue K Iwata; Yoshitaka Masutani; Mariko Yoshida; Osamu Abe; Yoshikazu Ugawa; Tomohiko Masumoto; Harushi Mori; Naoto Hayashi; Hiroyuki Kabasawa; Shin Kwak; Seizou Takahashi; Shoji Tsuji; Kuni Ohtomo
Journal:  Radiat Med       Date:  2005-05

6.  Validation of q-ball imaging with a diffusion fibre-crossing phantom on a clinical scanner.

Authors:  Muriel Perrin; Cyril Poupon; Bernard Rieul; Patrick Leroux; André Constantinesco; Jean-François Mangin; Denis Lebihan
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7.  Preoperative and intraoperative diffusion tensor imaging-based fiber tracking in glioma surgery.

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8.  Stroke patients' evolving symptoms assessed by tractography.

Authors:  Kei Yamada; Hirotoshi Ito; Hisao Nakamura; Osamu Kizu; Wataru Akada; Takao Kubota; Mariko Goto; Jyunya Konishi; Kenji Yoshikawa; Kensuke Shiga; Masanori Nakagawa; Susumu Mori; Tsunehiko Nishimura
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9.  Amyotrophic lateral sclerosis: diffusion tensor tractography and voxel-based analysis.

Authors:  Osamu Abe; Haruyasu Yamada; Yoshitaka Masutani; Shigeki Aoki; Akira Kunimatsu; Hidenori Yamasue; Rinmei Fukuda; Kiyoto Kasai; Naoto Hayashi; Tomohiko Masumoto; Harushi Mori; Tsutomu Soma; Kuni Ohtomo
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10.  Initial demonstration of in vivo tracing of axonal projections in the macaque brain and comparison with the human brain using diffusion tensor imaging and fast marching tractography.

Authors:  Geoffrey J M Parker; Klaas E Stephan; Gareth J Barker; James B Rowe; David G MacManus; Claudia A M Wheeler-Kingshott; Olga Ciccarelli; Richard E Passingham; Rachel L Spinks; Roger N Lemon; Robert Turner
Journal:  Neuroimage       Date:  2002-04       Impact factor: 6.556

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  9 in total

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Authors:  Andrew L Alexander; Samuel A Hurley; Alexey A Samsonov; Nagesh Adluru; Ameer Pasha Hosseinbor; Pouria Mossahebi; Do P M Tromp; Elizabeth Zakszewski; Aaron S Field
Journal:  Brain Connect       Date:  2012-01-27

2.  The reproducibility of measurements using a standardization phantom for the evaluation of fractional anisotropy (FA) derived from diffusion tensor imaging (DTI).

Authors:  Mitsuhiro Kimura; Hidetake Yabuuchi; Ryoji Matsumoto; Koji Kobayashi; Yasuo Yamashita; Kazuya Nagatomo; Ryoji Mikayama; Takeshi Kamitani; Koji Sagiyama; Yuzo Yamasaki
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3.  A controllably anisotropic conductivity or diffusion phantom constructed from isotropic layers.

Authors:  Rosalind J Sadleir; Farida Neralwala; Tang Te; Aaron Tucker
Journal:  Ann Biomed Eng       Date:  2009-09-16       Impact factor: 3.934

4.  Mathematical methods for diffusion MRI processing.

Authors:  C Lenglet; J S W Campbell; M Descoteaux; G Haro; P Savadjiev; D Wassermann; A Anwander; R Deriche; G B Pike; G Sapiro; K Siddiqi; P M Thompson
Journal:  Neuroimage       Date:  2008-11-13       Impact factor: 6.556

5.  Effects of MR parameter changes on the quantification of diffusion anisotropy and apparent diffusion coefficient in diffusion tensor imaging: evaluation using a diffusional anisotropic phantom.

Authors:  Sang Joon Kim; Choong Gon Choi; Jeong Kon Kim; Sung-Cheol Yun; Geon-Ho Jahng; Ha-Kyu Jeong; Eun Ju Kim
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6.  Validation of High-Resolution Tractography Against In Vivo Tracing in the Macaque Visual Cortex.

Authors:  Hojjatollah Azadbakht; Laura M Parkes; Hamied A Haroon; Mark Augath; Nikos K Logothetis; Alex de Crespigny; Helen E D'Arceuil; Geoffrey J M Parker
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7.  Liquid crystal phantom for validation of microscopic diffusion anisotropy measurements on clinical MRI systems.

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8.  Concerning the matching of magnetic susceptibility differences for the compensation of background gradients in anisotropic diffusion fibre phantoms.

Authors:  Ezequiel Farrher; Johannes Lindemeyer; Farida Grinberg; Ana-Maria Oros-Peusquens; N Jon Shah
Journal:  PLoS One       Date:  2017-05-03       Impact factor: 3.240

9.  Comparison of Glass Capillary Plates and Polyethylene Fiber Bundles as Phantoms to Assess the Quality of Diffusion Tensor Imaging.

Authors:  Atsushi Tachibana; Yasuhiko Tachibana; Jeff Kershaw; Hiromi Sano; Masahiro Fukushi; Takayuki Obata
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  9 in total

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