Literature DB >> 17093504

The blood peptidome: a higher dimension of information content for cancer biomarker discovery.

Emanuel F Petricoin1, Claudio Belluco, Robyn P Araujo, Lance A Liotta.   

Abstract

The low-molecular-weight range of the circulatory proteome is termed the 'peptidome', and could be a rich source of cancer-specific diagnostic information because it is a 'recording' of the cellular and extracellular enzymatic events that take place at the level of the cancer-tissue microenvironment. This new information archive seems to mainly exist in vivo, bound to high-abundance proteins such as albumin. Measuring panels of peptidome markers might be more sensitive and specific than conventional biomarker approaches. We discuss the advantages and disadvantages of various methods for studying the peptidome.

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Year:  2006        PMID： 17093504     DOI： 10.1038/nrc2011

Source DB:  PubMed          Journal:  Nat Rev Cancer        ISSN： 1474-175X            Impact factor:   60.716


  54 in total

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2.  Point: Proteomic patterns in biological fluids: do they represent the future of cancer diagnostics?

Authors:  Eleftherios P Diamandis
Journal:  Clin Chem       Date:  2003-08       Impact factor: 8.327

3.  Clinical proteomics: written in blood.

Authors:  Lance A Liotta; Mauro Ferrari; Emanuel Petricoin
Journal:  Nature       Date:  2003-10-30       Impact factor: 49.962

4.  Analysis of serum proteomic patterns for early cancer diagnosis: drawing attention to potential problems.

Authors:  Eleftherios P Diamandis
Journal:  J Natl Cancer Inst       Date:  2004-03-03       Impact factor: 13.506

5.  Characterization of the human blood plasma proteome.

Authors:  Yufeng Shen; Jeongkwon Kim; Eric F Strittmatter; Jon M Jacobs; David G Camp; Ruihua Fang; Nikola Tolié; Ronald J Moore; Richard D Smith
Journal:  Proteomics       Date:  2005-10       Impact factor: 3.984

6.  Analysis of Human Proteome Organization Plasma Proteome Project (HUPO PPP) reference specimens using surface enhanced laser desorption/ionization-time of flight (SELDI-TOF) mass spectrometry: multi-institution correlation of spectra and identification of biomarkers.

Authors:  Alex J Rai; Paul M Stemmer; Zhen Zhang; Bao-Ling Adam; William T Morgan; Rebecca E Caffrey; Vladimir N Podust; Manisha Patel; Lih-Yin Lim; Natalia V Shipulina; Daniel W Chan; O John Semmes; Hon-Chiu Eastwood Leung
Journal:  Proteomics       Date:  2005-08       Impact factor: 3.984

Review 7.  The peptidomics concept.

Authors:  Peter Schulz-Knappe; Michael Schrader; Hans-Dieter Zucht
Journal:  Comb Chem High Throughput Screen       Date:  2005-12       Impact factor: 1.339

8.  Use of proteomic patterns in serum to identify ovarian cancer.

Authors:  Emanuel F Petricoin; Ali M Ardekani; Ben A Hitt; Peter J Levine; Vincent A Fusaro; Seth M Steinberg; Gordon B Mills; Charles Simone; David A Fishman; Elise C Kohn; Lance A Liotta
Journal:  Lancet       Date:  2002-02-16       Impact factor: 79.321

9.  Proteomics and bioinformatics approaches for identification of serum biomarkers to detect breast cancer.

Authors:  Jinong Li; Zhen Zhang; Jason Rosenzweig; Young Y Wang; Daniel W Chan
Journal:  Clin Chem       Date:  2002-08       Impact factor: 8.327

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Authors:  Wei Chen; Konstantin V Salojin; Qing-Sheng Mi; Marsha Grattan; T Craig Meagher; Peter Zucker; Terry L Delovitch
Journal:  Endocrinology       Date:  2003-11-14       Impact factor: 4.736
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  82 in total

Review 1.  Screening for colorectal cancer: established and emerging modalities.

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Journal:  Nat Rev Gastroenterol Hepatol       Date:  2011-11-01       Impact factor: 46.802

Review 2.  The grand challenge to decipher the cancer proteome.

Authors:  Samir Hanash; Ayumu Taguchi
Journal:  Nat Rev Cancer       Date:  2010-09       Impact factor: 60.716

Review 3.  Enabling individualized therapy through nanotechnology.

Authors:  Jason H Sakamoto; Anne L van de Ven; Biana Godin; Elvin Blanco; Rita E Serda; Alessandro Grattoni; Arturas Ziemys; Ali Bouamrani; Tony Hu; Shivakumar I Ranganathan; Enrica De Rosa; Jonathan O Martinez; Christine A Smid; Rachel M Buchanan; Sei-Young Lee; Srimeenakshi Srinivasan; Matthew Landry; Anne Meyn; Ennio Tasciotti; Xuewu Liu; Paolo Decuzzi; Mauro Ferrari
Journal:  Pharmacol Res       Date:  2010-01-05       Impact factor: 7.658

Review 4.  Analyzing the cryptome: uncovering secret sequences.

Authors:  Parimal Samir; Andrew J Link
Journal:  AAPS J       Date:  2011-02-16       Impact factor: 4.009

5.  Preparation of magnetic graphene composites with hierarchical structure for selective capture of phosphopeptides.

Authors:  Gong Cheng; Xu Yu; Mingda Zhou; Siyang Zheng
Journal:  J Mater Chem B       Date:  2014       Impact factor: 6.331

6.  Self-assembly of random co-polymers for selective binding and detection of peptides.

Authors:  Bo Zhao; Mahalia A C Serrano; Jingjing Gao; Jiaming Zhuang; Richard W Vachet; S Thayumanavan
Journal:  Polym Chem       Date:  2017-12-19       Impact factor: 5.582

7.  Serum protein profiling of smear-positive and smear-negative pulmonary tuberculosis using SELDI-TOF mass spectrometry.

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Journal:  Lung       Date:  2009-12-09       Impact factor: 2.584

8.  Mesoporous silica chips for selective enrichment and stabilization of low molecular weight proteome.

Authors:  Ali Bouamrani; Ye Hu; Ennio Tasciotti; Li Li; Ciro Chiappini; Xuewu Liu; Mauro Ferrari
Journal:  Proteomics       Date:  2010-02       Impact factor: 3.984

9.  Tailoring of the nanotexture of mesoporous silica films and their functionalized derivatives for selectively harvesting low molecular weight protein.

Authors:  Ye Hu; Ali Bouamrani; Ennio Tasciotti; Li Li; Xuewu Liu; Mauro Ferrari
Journal:  ACS Nano       Date:  2010-01-26       Impact factor: 15.881

Review 10.  Silicon micro- and nanofabrication for medicine.

Authors:  Daniel Fine; Alessandro Grattoni; Randy Goodall; Shyam S Bansal; Ciro Chiappini; Sharath Hosali; Anne L van de Ven; Srimeenkashi Srinivasan; Xuewu Liu; Biana Godin; Louis Brousseau; Iman K Yazdi; Joseph Fernandez-Moure; Ennio Tasciotti; Hung-Jen Wu; Ye Hu; Steve Klemm; Mauro Ferrari
Journal:  Adv Healthc Mater       Date:  2013-04-15       Impact factor: 9.933
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