Literature DB >> 17088435

Spotlight on molecular profiling: "Integromic" analysis of the NCI-60 cancer cell lines.

John N Weinstein1.   

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Year:  2006        PMID: 17088435     DOI: 10.1158/1535-7163.MCT-06-0640

Source DB:  PubMed          Journal:  Mol Cancer Ther        ISSN: 1535-7163            Impact factor:   6.261


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  40 in total

1.  mRNA and microRNA expression profiles of the NCI-60 integrated with drug activities.

Authors:  Hongfang Liu; Petula D'Andrade; Stephanie Fulmer-Smentek; Philip Lorenzi; Kurt W Kohn; John N Weinstein; Yves Pommier; William C Reinhold
Journal:  Mol Cancer Ther       Date:  2010-05-04       Impact factor: 6.261

2.  Predicting in vitro drug sensitivity using Random Forests.

Authors:  Gregory Riddick; Hua Song; Susie Ahn; Jennifer Walling; Diego Borges-Rivera; Wei Zhang; Howard A Fine
Journal:  Bioinformatics       Date:  2010-12-05       Impact factor: 6.937

3.  Subtype and pathway specific responses to anticancer compounds in breast cancer.

Authors:  Laura M Heiser; Anguraj Sadanandam; Wen-Lin Kuo; Stephen C Benz; Theodore C Goldstein; Sam Ng; William J Gibb; Nicholas J Wang; Safiyyah Ziyad; Frances Tong; Nora Bayani; Zhi Hu; Jessica I Billig; Andrea Dueregger; Sophia Lewis; Lakshmi Jakkula; James E Korkola; Steffen Durinck; François Pepin; Yinghui Guan; Elizabeth Purdom; Pierre Neuvial; Henrik Bengtsson; Kenneth W Wood; Peter G Smith; Lyubomir T Vassilev; Bryan T Hennessy; Joel Greshock; Kurtis E Bachman; Mary Ann Hardwicke; John W Park; Laurence J Marton; Denise M Wolf; Eric A Collisson; Richard M Neve; Gordon B Mills; Terence P Speed; Heidi S Feiler; Richard F Wooster; David Haussler; Joshua M Stuart; Joe W Gray; Paul T Spellman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-14       Impact factor: 11.205

4.  Mutation analysis of 24 known cancer genes in the NCI-60 cell line set.

Authors:  Ogechi N Ikediobi; Helen Davies; Graham Bignell; Sarah Edkins; Claire Stevens; Sarah O'Meara; Thomas Santarius; Tim Avis; Syd Barthorpe; Lisa Brackenbury; Gemma Buck; Adam Butler; Jody Clements; Jennifer Cole; Ed Dicks; Simon Forbes; Kristian Gray; Kelly Halliday; Rachel Harrison; Katy Hills; Jonathan Hinton; Chris Hunter; Andy Jenkinson; David Jones; Vivienne Kosmidou; Richard Lugg; Andrew Menzies; Tatiana Mironenko; Adrian Parker; Janet Perry; Keiran Raine; David Richardson; Rebecca Shepherd; Alex Small; Raffaella Smith; Helen Solomon; Philip Stephens; Jon Teague; Calli Tofts; Jennifer Varian; Tony Webb; Sofie West; Sara Widaa; Andy Yates; William Reinhold; John N Weinstein; Michael R Stratton; P Andrew Futreal; Richard Wooster
Journal:  Mol Cancer Ther       Date:  2006-11-06       Impact factor: 6.261

Review 5.  Functional genomics in radiation biology: a gateway to cellular systems-level studies.

Authors:  Sally A Amundson
Journal:  Radiat Environ Biophys       Date:  2007-11-01       Impact factor: 1.925

6.  Profiling SLCO and SLC22 genes in the NCI-60 cancer cell lines to identify drug uptake transporters.

Authors:  Mitsunori Okabe; Gergely Szakács; Mark A Reimers; Toshihiro Suzuki; Matthew D Hall; Takaaki Abe; John N Weinstein; Michael M Gottesman
Journal:  Mol Cancer Ther       Date:  2008-09       Impact factor: 6.261

7.  Chromosomal instability is associated with higher expression of genes implicated in epithelial-mesenchymal transition, cancer invasiveness, and metastasis and with lower expression of genes involved in cell cycle checkpoints, DNA repair, and chromatin maintenance.

Authors:  Anna V Roschke; Oleg K Glebov; Samir Lababidi; Kristen S Gehlhaus; John N Weinstein; Ilan R Kirsch
Journal:  Neoplasia       Date:  2008-11       Impact factor: 5.715

8.  Multifactorial regulation of E-cadherin expression: an integrative study.

Authors:  William C Reinhold; Mark A Reimers; Philip Lorenzi; Jennifer Ho; Uma T Shankavaram; Micah S Ziegler; Kimberly J Bussey; Satoshi Nishizuka; Ogechi Ikediobi; Yves G Pommier; John N Weinstein
Journal:  Mol Cancer Ther       Date:  2010-01-06       Impact factor: 6.261

9.  Global comparative gene expression analysis of melanoma patient samples, derived cell lines and corresponding tumor xenografts.

Authors:  Yaguang Xi; Adam Riker; Lalita Shevde-Samant; Rajeev Samant; Christopher Morris; Elaine Gavin; Oystein Fodstad; Jingfang Ju
Journal:  Cancer Genomics Proteomics       Date:  2008 Jan-Feb       Impact factor: 4.069

10.  CellMiner: a relational database and query tool for the NCI-60 cancer cell lines.

Authors:  Uma T Shankavaram; Sudhir Varma; David Kane; Margot Sunshine; Krishna K Chary; William C Reinhold; Yves Pommier; John N Weinstein
Journal:  BMC Genomics       Date:  2009-06-23       Impact factor: 3.969

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