Literature DB >> 17085683

The exoribonuclease XRN4 is a component of the ethylene response pathway in Arabidopsis.

Thomas Potuschak1, Amérin Vansiri, Brad M Binder, Esther Lechner, Richard D Vierstra, Pascal Genschik.   

Abstract

EXORIBONUCLEASE4 (XRN4), the Arabidopsis thaliana homolog of yeast XRN1, is involved in the degradation of several unstable mRNAs. Although a role for XRN4 in RNA silencing of certain transgenes has been reported, xrn4 mutant plants were found to lack any apparent visible phenotype. Here, we show that XRN4 is allelic to the unidentified components of the ethylene response pathway ETHYLENE-INSENSITIVE5/ACC-INSENSITIVE1 (EIN5/AIN1) and EIN7. xrn4 mutant seedlings are ethylene-insensitive as a consequence of the upregulation of EIN3 BINDING F-BOX PROTEIN1 (EBF1) and EBF2 mRNA levels, which encode related F-box proteins involved in the turnover of EIN3 protein, a crucial transcriptional regulator of the ethylene response pathway. Epistasis analysis placed XRN4/EIN5/AIN1 downstream of CTR1 and upstream of EBF1/2. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. The identification of XRN4 as an integral new component in ethylene signaling adds RNA degradation as another posttranscriptional process that modulates the perception of this plant hormone.

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Year:  2006        PMID: 17085683      PMCID: PMC1693942          DOI: 10.1105/tpc.106.046508

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  45 in total

1.  Plant responses to ethylene gas are mediated by SCF(EBF1/EBF2)-dependent proteolysis of EIN3 transcription factor.

Authors:  Hongwei Guo; Joseph R Ecker
Journal:  Cell       Date:  2003-12-12       Impact factor: 41.582

Review 2.  The diversity of RNA silencing pathways in plants.

Authors:  Peter Brodersen; Olivier Voinnet
Journal:  Trends Genet       Date:  2006-03-29       Impact factor: 11.639

3.  Red Light-Independent Instability of Oat Phytochrome mRNA in Vivo.

Authors:  K. A. Seeley; D. H. Byrne; J. T. Colbert
Journal:  Plant Cell       Date:  1992-01       Impact factor: 11.277

4.  ARE-mRNA degradation requires the 5'-3' decay pathway.

Authors:  Georg Stoecklin; Thomas Mayo; Paul Anderson
Journal:  EMBO Rep       Date:  2006-01       Impact factor: 8.807

5.  ETHYLENE-INSENSITIVE5 encodes a 5'-->3' exoribonuclease required for regulation of the EIN3-targeting F-box proteins EBF1/2.

Authors:  Gabriela Olmedo; Hongwei Guo; Brian D Gregory; Saeid D Nourizadeh; Laura Aguilar-Henonin; Hongjiang Li; Fengying An; Plinio Guzman; Joseph R Ecker
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-18       Impact factor: 11.205

6.  Downstream divergence of the ethylene signaling pathway for harpin-stimulated Arabidopsis growth and insect defense.

Authors:  Hong-Ping Dong; Jianling Peng; Zhilong Bao; Xiangdong Meng; Jean M Bonasera; Guangyong Chen; Steven V Beer; Hansong Dong
Journal:  Plant Physiol       Date:  2004-10-29       Impact factor: 8.340

7.  Identification of unstable transcripts in Arabidopsis by cDNA microarray analysis: rapid decay is associated with a group of touch- and specific clock-controlled genes.

Authors:  Rodrigo A Gutierrez; Rob M Ewing; J Michael Cherry; Pamela J Green
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-07       Impact factor: 11.205

8.  Arabidopsis EIN3-binding F-box 1 and 2 form ubiquitin-protein ligases that repress ethylene action and promote growth by directing EIN3 degradation.

Authors:  Jennifer M Gagne; Jan Smalle; Derek J Gingerich; Joseph M Walker; Sang-Dong Yoo; Shuichi Yanagisawa; Richard D Vierstra
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-16       Impact factor: 11.205

9.  Genetic analysis of ethylene signal transduction in Arabidopsis thaliana: five novel mutant loci integrated into a stress response pathway.

Authors:  G Roman; B Lubarsky; J J Kieber; M Rothenberg; J R Ecker
Journal:  Genetics       Date:  1995-03       Impact factor: 4.562

10.  Differential regulation of EIN3 stability by glucose and ethylene signalling in plants.

Authors:  Shuichi Yanagisawa; Sang-Dong Yoo; Jen Sheen
Journal:  Nature       Date:  2003-10-02       Impact factor: 49.962

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  41 in total

Review 1.  Processing bodies and plant development.

Authors:  Jun Xu; Nam-Hai Chua
Journal:  Curr Opin Plant Biol       Date:  2010-11-11       Impact factor: 7.834

Review 2.  NMD mechanism and the functions of Upf proteins in plant.

Authors:  Yiming Dai; Wenli Li; Lijia An
Journal:  Plant Cell Rep       Date:  2015-09-23       Impact factor: 4.570

Review 3.  The ubiquitin-26S proteasome system at the nexus of plant biology.

Authors:  Richard D Vierstra
Journal:  Nat Rev Mol Cell Biol       Date:  2009-05-08       Impact factor: 94.444

4.  Two different mechanisms control ethylene sensitivity in Arabidopsis via the regulation of EBF2 expression.

Authors:  Mineko Konishi; Shuichi Yanagisawa
Journal:  Plant Signal Behav       Date:  2008-09

Review 5.  Reconstruction of Arabidopsis thaliana fully integrated small RNA pathway.

Authors:  Sadegh Azimzadeh Jamalkandi; Ali Masoudi-Nejad
Journal:  Funct Integr Genomics       Date:  2009-11       Impact factor: 3.410

6.  The BTB ubiquitin ligases ETO1, EOL1 and EOL2 act collectively to regulate ethylene biosynthesis in Arabidopsis by controlling type-2 ACC synthase levels.

Authors:  Matthew J Christians; Derek J Gingerich; Maureen Hansen; Brad M Binder; Joseph J Kieber; Richard D Vierstra
Journal:  Plant J       Date:  2008-10-30       Impact factor: 6.417

Review 7.  Interconnections between mRNA degradation and RDR-dependent siRNA production in mRNA turnover in plants.

Authors:  Masayuki Tsuzuki; Kazuki Motomura; Naoyoshi Kumakura; Atsushi Takeda
Journal:  J Plant Res       Date:  2017-02-14       Impact factor: 2.629

8.  Transcriptome-wide analysis of uncapped mRNAs in Arabidopsis reveals regulation of mRNA degradation.

Authors:  Yuling Jiao; José Luis Riechmann; Elliot M Meyerowitz
Journal:  Plant Cell       Date:  2008-10-24       Impact factor: 11.277

9.  Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA.

Authors:  Monika Zakrzewska-Placzek; Frederic F Souret; Grzegorz J Sobczyk; Pamela J Green; Joanna Kufel
Journal:  Nucleic Acids Res       Date:  2010-03-24       Impact factor: 16.971

10.  Chromatin Regulation in the Response of Ethylene: Nuclear Events in Ethylene Signaling.

Authors:  Likai Wang; Fan Zhang; Hong Qiao
Journal:  Small Methods       Date:  2019-07-04
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