Literature DB >> 17078022

Consortium for osteogenesis imperfecta mutations in the helical domain of type I collagen: regions rich in lethal mutations align with collagen binding sites for integrins and proteoglycans.

Joan C Marini1, Antonella Forlino, Wayne A Cabral, Aileen M Barnes, James D San Antonio, Sarah Milgrom, James C Hyland, Jarmo Körkkö, Darwin J Prockop, Anne De Paepe, Paul Coucke, Sofie Symoens, Francis H Glorieux, Peter J Roughley, Alan M Lund, Kaija Kuurila-Svahn, Heini Hartikka, Daniel H Cohn, Deborah Krakow, Monica Mottes, Ulrike Schwarze, Diana Chen, Kathleen Yang, Christine Kuslich, James Troendle, Raymond Dalgleish, Peter H Byers.   

Abstract

Osteogenesis imperfecta (OI) is a generalized disorder of connective tissue characterized by fragile bones and easy susceptibility to fracture. Most cases of OI are caused by mutations in type I collagen. We have identified and assembled structural mutations in type I collagen genes (COL1A1 and COL1A2, encoding the proalpha1(I) and proalpha2(I) chains, respectively) that result in OI. Quantitative defects causing type I OI were not included. Of these 832 independent mutations, 682 result in substitution for glycine residues in the triple helical domain of the encoded protein and 150 alter splice sites. Distinct genotype-phenotype relationships emerge for each chain. One-third of the mutations that result in glycine substitutions in alpha1(I) are lethal, especially when the substituting residues are charged or have a branched side chain. Substitutions in the first 200 residues are nonlethal and have variable outcome thereafter, unrelated to folding or helix stability domains. Two exclusively lethal regions (helix positions 691-823 and 910-964) align with major ligand binding regions (MLBRs), suggesting crucial interactions of collagen monomers or fibrils with integrins, matrix metalloproteinases (MMPs), fibronectin, and cartilage oligomeric matrix protein (COMP). Mutations in COL1A2 are predominantly nonlethal (80%). Lethal substitutions are located in eight regularly spaced clusters along the chain, supporting a regional model. The lethal regions align with proteoglycan binding sites along the fibril, suggesting a role in fibril-matrix interactions. Recurrences at the same site in alpha2(I) are generally concordant for outcome, unlike alpha1(I). Splice site mutations comprise 20% of helical mutations identified in OI patients, and may lead to exon skipping, intron inclusion, or the activation of cryptic splice sites. Splice site mutations in COL1A1 are rarely lethal; they often lead to frameshifts and the mild type I phenotype. In alpha2(I), lethal exon skipping events are located in the carboxyl half of the chain. Our data on genotype-phenotype relationships indicate that the two collagen chains play very different roles in matrix integrity and that phenotype depends on intracellular and extracellular events.

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Year:  2007        PMID: 17078022      PMCID: PMC4144349          DOI: 10.1002/humu.20429

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  67 in total

1.  Prediction of collagen stability from amino acid sequence.

Authors:  Anton V Persikov; John A M Ramshaw; Barbara Brodsky
Journal:  J Biol Chem       Date:  2005-03-07       Impact factor: 5.157

2.  Total absence of the alpha2(I) chain of collagen type I causes a rare form of Ehlers-Danlos syndrome with hypermobility and propensity to cardiac valvular problems.

Authors:  F Malfait; S Symoens; P Coucke; L Nunes; S De Almeida; A De Paepe
Journal:  J Med Genet       Date:  2006-07       Impact factor: 6.318

3.  Inhibition of the self-assembly of collagen I into fibrils with synthetic peptides. Demonstration that assembly is driven by specific binding sites on the monomers.

Authors:  D J Prockop; A Fertala
Journal:  J Biol Chem       Date:  1998-06-19       Impact factor: 5.157

4.  Defining the domains of type I collagen involved in heparin- binding and endothelial tube formation.

Authors:  S M Sweeney; C A Guy; G B Fields; J D San Antonio
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-23       Impact factor: 11.205

Review 5.  Proteoglycan-fibrillar collagen interactions.

Authors:  J E Scott
Journal:  Biochem J       Date:  1988-06-01       Impact factor: 3.857

6.  Mutations near amino end of alpha1(I) collagen cause combined osteogenesis imperfecta/Ehlers-Danlos syndrome by interference with N-propeptide processing.

Authors:  Wayne A Cabral; Elena Makareeva; Alain Colige; Anne D Letocha; Jennifer M Ty; Heather N Yeowell; Gerard Pals; Sergey Leikin; Joan C Marini
Journal:  J Biol Chem       Date:  2005-02-22       Impact factor: 5.157

7.  Nonsense mutations in the COL1A1 gene preferentially reduce nuclear levels of mRNA but not hnRNA in osteogenesis imperfecta type I cell strains.

Authors:  R L Slayton; S P Deschenes; M C Willing
Journal:  Matrix Biol       Date:  2000-02       Impact factor: 11.583

8.  Analysis of cytoplasmic and nuclear messenger RNA in fibroblasts from patients with type I osteogenesis imperfecta.

Authors:  C Genovese; D Rowe
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

9.  The molecular genetics of collagen.

Authors:  B Sykes
Journal:  Bioessays       Date:  1985-09       Impact factor: 4.345

10.  Osteogenesis imperfecta type IV. Detection of a point mutation in one alpha 1(I) collagen allele (COL1A1) by RNA/RNA hybrid analysis.

Authors:  J C Marini; D K Grange; G S Gottesman; M B Lewis; D A Koeplin
Journal:  J Biol Chem       Date:  1989-07-15       Impact factor: 5.157

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  241 in total

1.  Genetic analysis of serum osteocalcin and bone mineral in multigenerational Afro-Caribbean families.

Authors:  A L Kuipers; C Gundberg; C M Kammerer; A S Dressen; C S Nestlerode; A L Patrick; V W Wheeler; C H Bunker; A B Newman; J M Zmuda
Journal:  Osteoporos Int       Date:  2011-09-21       Impact factor: 4.507

2.  Folding delay and structural perturbations caused by type IV collagen natural interruptions and nearby Gly missense mutations.

Authors:  Eileen S Hwang; Barbara Brodsky
Journal:  J Biol Chem       Date:  2011-12-16       Impact factor: 5.157

3.  Interruptions in the collagen repeating tripeptide pattern can promote supramolecular association.

Authors:  Eileen S Hwang; Geetha Thiagarajan; Avanish S Parmar; Barbara Brodsky
Journal:  Protein Sci       Date:  2010-05       Impact factor: 6.725

4.  Fibrochondrogenesis results from mutations in the COL11A1 type XI collagen gene.

Authors:  Stuart W Tompson; Carlos A Bacino; Nicole P Safina; Michael B Bober; Virginia K Proud; Tara Funari; Michael F Wangler; Lisette Nevarez; Leena Ala-Kokko; William R Wilcox; David R Eyre; Deborah Krakow; Daniel H Cohn
Journal:  Am J Hum Genet       Date:  2010-10-28       Impact factor: 11.025

5.  Location of glycine mutations within a bacterial collagen protein affects degree of disruption of triple-helix folding and conformation.

Authors:  Haiming Cheng; Shayan Rashid; Zhuoxin Yu; Ayumi Yoshizumi; Eileen Hwang; Barbara Brodsky
Journal:  J Biol Chem       Date:  2010-11-11       Impact factor: 5.157

6.  CD and NMR investigation of collagen peptides mimicking a pathological Gly-Ser mutation and a natural interruption in a similar highly charged sequence context.

Authors:  Xiuxia Sun; Songqing Liu; Wenyuan Yu; Shaoru Wang; Jianxi Xiao
Journal:  Protein Sci       Date:  2015-11-26       Impact factor: 6.725

7.  Gene mutation spectrum and genotype-phenotype correlation in a cohort of Chinese osteogenesis imperfecta patients revealed by targeted next generation sequencing.

Authors:  Y Liu; D Ma; F Lv; X Xu; J Wang; W Xia; Y Jiang; O Wang; X Xing; W Yu; J Wang; J Sun; L Song; Y Zhu; H Yang; J Wang; M Li
Journal:  Osteoporos Int       Date:  2017-07-19       Impact factor: 4.507

8.  Collagen Gly missense mutations: Effect of residue identity on collagen structure and integrin binding.

Authors:  Yimin Qiu; Arya Mekkat; Hongtao Yu; Sezin Yigit; Samir Hamaia; Richard W Farndale; David L Kaplan; Yu-Shan Lin; Barbara Brodsky
Journal:  J Struct Biol       Date:  2018-05-11       Impact factor: 2.867

9.  Bacterial collagen-like proteins that form triple-helical structures.

Authors:  Zhuoxin Yu; Bo An; John A M Ramshaw; Barbara Brodsky
Journal:  J Struct Biol       Date:  2014-01-14       Impact factor: 2.867

Review 10.  Osteogenesis imperfecta and therapeutics.

Authors:  Roy Morello
Journal:  Matrix Biol       Date:  2018-03-11       Impact factor: 11.583

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