Literature DB >> 17070083

Comparison of maximum entropy and filtered back-projection methods to reconstruct rapid-scan EPR images.

Mark Tseitlin1, Amarjot Dhami, Sandra S Eaton, Gareth R Eaton.   

Abstract

Reconstruction of two-dimensional images by filtered back-projection (FBP) and by the maximum entropy method (MEM) was compared for spectral-spatial EPR images with differing signal-to-noise ratios. Experimental projections were recorded using direct-detected rapid scans in the presence of a series of magnetic field gradients. The slow-scan absorption lineshapes were calculated by Fourier deconvolution. A Hamming filter was used in conjunction with FBP, but not for MEM. Imperfections in real experimental data, as well as random noise, contribute to discrepancies between the reconstructed image and experimental projections, which may make it impossible to achieve the customary MEM criterion for convergence. The Cambridge MEM algorithm, with allowance for imperfections in experimental data, produced images with more linear intensity scales and more accurate linewidths for weak signals than was obtained with another MEM method. The more effective elimination of noise in baseline regions by MEM made it possible to detect weak trityl (13)C trityl hyperfine lines that could not be distinguished from noise in images reconstructed by FBP. Another advantage of MEM is that projections do not need to be equally spaced. FBP has the advantages that computational time is less, the amplitude scale is linear, and there is less noise superimposed on peaks in images. It is useful to reconstruct images by both methods and compare results. Our observations indicate that FBP works well when the number of projections is large enough that the star effect is negligible. When there is a smaller number of projections, projections are unequally spaced, and/or signal-to-noise is lower MEM is advantageous.

Mesh:

Year:  2006        PMID: 17070083      PMCID: PMC2744395          DOI: 10.1016/j.jmr.2006.09.027

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  12 in total

1.  Modern spectrum analysis in multidimensional NMR spectroscopy: comparison of linear-prediction extrapolation and maximum-entropy reconstruction.

Authors:  Alan S Stern; Kuo-Bin Li; Jeffrey C Hoch
Journal:  J Am Chem Soc       Date:  2002-03-06       Impact factor: 15.419

2.  Progressive EPR imaging with adaptive projection acquisition.

Authors:  Yuanmu Deng; Periannan Kuppusamy; Jay L Zweier
Journal:  J Magn Reson       Date:  2005-06       Impact factor: 2.229

3.  The determination of pair distance distributions by pulsed ESR using Tikhonov regularization.

Authors:  Yun-Wei Chiang; Peter P Borbat; Jack H Freed
Journal:  J Magn Reson       Date:  2005-02       Impact factor: 2.229

4.  Spectral reconstruction methods in fast NMR: reduced dimensionality, random sampling and maximum entropy.

Authors:  Mehdi Mobli; Alan S Stern; Jeffrey C Hoch
Journal:  J Magn Reson       Date:  2006-07-11       Impact factor: 2.229

Review 5.  Why MEM does not work in MR image reconstruction.

Authors:  R T Constable; R M Henkelman
Journal:  Magn Reson Med       Date:  1990-04       Impact factor: 4.668

6.  Quantification of maximum-entropy spectrum reconstructions.

Authors:  P Schmieder; A S Stern; G Wagner; J C Hoch
Journal:  J Magn Reson       Date:  1997-04       Impact factor: 2.229

7.  The use of quantified maximum entropy methods for optimising information from electron paramagnetic resonance spectroscopy.

Authors:  B A Goodman; S M Glidewell; J Skilling
Journal:  Free Radic Res       Date:  1995-04

8.  Reconstruction of images from radiofrequency electron paramagnetic resonance spectra.

Authors:  C M Smith; A D Stevens
Journal:  Br J Radiol       Date:  1994-12       Impact factor: 3.039

9.  Rapid-scan EPR with triangular scans and fourier deconvolution to recover the slow-scan spectrum.

Authors:  Janhavi P Joshi; John R Ballard; George A Rinard; Richard W Quine; Sandra S Eaton; Gareth R Eaton
Journal:  J Magn Reson       Date:  2005-04-14       Impact factor: 2.229

10.  Direct-detected rapid-scan EPR at 250 MHz.

Authors:  James W Stoner; Dennis Szymanski; Sandra S Eaton; Richard W Quine; George A Rinard; Gareth R Eaton
Journal:  J Magn Reson       Date:  2004-09       Impact factor: 2.229

View more
  14 in total

1.  Multiple-stepped Zeeman field offset method applied in acquiring enhanced resolution spin-echo electron paramagnetic resonance images.

Authors:  Payam Seifi; Boris Epel; Colin Mailer; Howard J Halpern
Journal:  Med Phys       Date:  2010-10       Impact factor: 4.071

2.  Fast 3D spatial EPR imaging using spiral magnetic field gradient.

Authors:  Yuanmu Deng; Sergy Petryakov; Guanglong He; Eric Kesselring; Periannan Kuppusamy; Jay L Zweier
Journal:  J Magn Reson       Date:  2007-01-08       Impact factor: 2.229

3.  Uniform distribution of projection data for improved reconstruction quality of 4D EPR imaging.

Authors:  Rizwan Ahmad; Deepti S Vikram; Bradley Clymer; Lee C Potter; Yuanmu Deng; Parthasarathy Srinivasan; Jay L Zweier; Periannan Kuppusamy
Journal:  J Magn Reson       Date:  2007-05-25       Impact factor: 2.229

4.  Compressed sensing of spatial electron paramagnetic resonance imaging.

Authors:  David H Johnson; Rizwan Ahmad; Guanglong He; Alexandre Samouilov; Jay L Zweier
Journal:  Magn Reson Med       Date:  2013-10-07       Impact factor: 4.668

5.  Comparison of parabolic filtration methods for 3D filtered back projection in pulsed EPR imaging.

Authors:  Zhiwei Qiao; Gage Redler; Boris Epel; Howard J Halpern
Journal:  J Magn Reson       Date:  2014-08-29       Impact factor: 2.229

Review 6.  Theory, instrumentation, and applications of electron paramagnetic resonance oximetry.

Authors:  Rizwan Ahmad; Periannan Kuppusamy
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

7.  Regularized optimization (RO) reconstruction for oximetric EPR imaging.

Authors:  Mark Tseitlin; Tomasz Czechowski; Sandra S Eaton; Gareth R Eaton
Journal:  J Magn Reson       Date:  2008-07-10       Impact factor: 2.229

8.  A Linear Magnetic Field Scan Driver.

Authors:  Richard W Quine; Tomasz Czechowski; Gareth R Eaton
Journal:  Concepts Magn Reson Part B Magn Reson Eng       Date:  2009-02-01       Impact factor: 1.176

9.  Use of rapid-scan EPR to improve detection sensitivity for spin-trapped radicals.

Authors:  Deborah G Mitchell; Gerald M Rosen; Mark Tseitlin; Breanna Symmes; Sandra S Eaton; Gareth R Eaton
Journal:  Biophys J       Date:  2013-07-16       Impact factor: 4.033

10.  New spectral-spatial imaging algorithm for full EPR spectra of multiline nitroxides and pH sensitive trityl radicals.

Authors:  Mark Tseitlin; Joshua R Biller; Hanan Elajaili; Valery V Khramtsov; Ilirian Dhimitruka; Gareth R Eaton; Sandra S Eaton
Journal:  J Magn Reson       Date:  2014-06-17       Impact factor: 2.229

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.