Literature DB >> 17053085

A novel single amino acid change in small subunit ribosomal protein S5 has profound effects on translational fidelity.

Narayanaswamy Kirthi1, Biswajoy Roy-Chaudhuri, Teresa Kelley, Gloria M Culver.   

Abstract

S5 is a small subunit ribosomal protein (r-protein) linked to the functional center of the 30S ribosomal subunit. In this study we have identified a unique amino acid mutation in Escherichia coli S5 that produces spectinomycin-resistance and cold sensitivity. This mutation significantly alters cell growth, folding of 16S ribosomal RNA, and translational fidelity. While translation initiation is not affected, both +1 and -1 frameshifting and nonsense suppression are greatly enhanced in the mutant strain. Interestingly, this S5 ribosome ambiguity-like mutation is spatially remote from previously identified S5 ribosome ambiguity (ram) mutations. This suggests that the mechanism responsible for ram phenotypes in the novel mutant strain is possibly distinct from those proposed for other known S5 (and S4) ram mutants. This study highlights the importance of S5 in ribosome function and cell physiology, and suggests that translational fidelity can be regulated in multiple ways.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 17053085      PMCID: PMC1664723          DOI: 10.1261/rna.302006

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  55 in total

1.  Effect of different mutations in ribosomal protein S5 of Escherichia coli on translational fidelity.

Authors:  W Piepersberg; A Böck; H G Wittmann
Journal:  Mol Gen Genet       Date:  1975-09-29

Review 2.  Ribosome structure and the mechanism of translation.

Authors:  V Ramakrishnan
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

3.  Mapping structural differences between 30S ribosomal subunit assembly intermediates.

Authors:  Kristi L Holmes; Gloria M Culver
Journal:  Nat Struct Mol Biol       Date:  2004-01-11       Impact factor: 15.369

4.  Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA.

Authors:  D Moazed; H F Noller
Journal:  J Mol Biol       Date:  1990-01-05       Impact factor: 5.469

5.  Localization of the amino-acid exchange in protein S5 from an Escherichia coli mutant resistant to spectinomycin.

Authors:  M DeWilde; B Wittmann-Liebold
Journal:  Mol Gen Genet       Date:  1973-12-31

6.  Antibiotic resistance mutations in 16S and 23S ribosomal RNA genes of Escherichia coli.

Authors:  C D Sigmund; M Ettayebi; E A Morgan
Journal:  Nucleic Acids Res       Date:  1984-06-11       Impact factor: 16.971

7.  Structure and function of bacterial ribosomes. XII. Accumulation of 21 s particles by some cold-sensitive mutants of Escherichia coli.

Authors:  H Nashimoto; W Held; E Kaltschmidt; M Nomura
Journal:  J Mol Biol       Date:  1971-11-28       Impact factor: 5.469

8.  Mutations in ribosomal proteins S4 and S12 influence the higher order structure of 16 S ribosomal RNA.

Authors:  P N Allen; H F Noller
Journal:  J Mol Biol       Date:  1989-08-05       Impact factor: 5.469

9.  Efficient reconstitution of functional Escherichia coli 30S ribosomal subunits from a complete set of recombinant small subunit ribosomal proteins.

Authors:  G M Culver; H F Noller
Journal:  RNA       Date:  1999-06       Impact factor: 4.942

10.  Studies on transformation of Escherichia coli with plasmids.

Authors:  D Hanahan
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

View more
  23 in total

1.  Translational defects in a mutant deficient in YajL, the bacterial homolog of the parkinsonism-associated protein DJ-1.

Authors:  Fatoum Kthiri; Valérie Gautier; Hai-Tuong Le; Marie-Françoise Prère; Olivier Fayet; Abderrahim Malki; Ahmed Landoulsi; Gilbert Richarme
Journal:  J Bacteriol       Date:  2010-10-01       Impact factor: 3.490

2.  Genome engineering using targeted oligonucleotide libraries and functional selection.

Authors:  Elie J Diner; Fernando Garza-Sánchez; Christopher S Hayes
Journal:  Methods Mol Biol       Date:  2011

3.  Appropriate maturation and folding of 16S rRNA during 30S subunit biogenesis are critical for translational fidelity.

Authors:  Biswajoy Roy-Chaudhuri; Narayanaswamy Kirthi; Gloria M Culver
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-22       Impact factor: 11.205

4.  Neisseria gonorrhoeae strain with high-level resistance to spectinomycin due to a novel resistance mechanism (mutated ribosomal protein S5) verified in Norway.

Authors:  Magnus Unemo; Daniel Golparian; Vegard Skogen; Anne Olaug Olsen; Harald Moi; Gaute Syversen; Stig Ove Hjelmevoll
Journal:  Antimicrob Agents Chemother       Date:  2012-11-26       Impact factor: 5.191

5.  Programmed -1 frameshifting efficiency correlates with RNA pseudoknot conformational plasticity, not resistance to mechanical unfolding.

Authors:  Dustin B Ritchie; Daniel A N Foster; Michael T Woodside
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-17       Impact factor: 11.205

6.  Molecular mechanics of 30S subunit head rotation.

Authors:  Srividya Mohan; John Paul Donohue; Harry F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-03       Impact factor: 11.205

7.  Rational elicitation of cold-sensitive phenotypes.

Authors:  Chetana Baliga; Sandipan Majhi; Kajari Mondal; Antara Bhattacharjee; K VijayRaghavan; Raghavan Varadarajan
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-18       Impact factor: 11.205

8.  The Loop 2 Region of Ribosomal Protein uS5 Influences Spectinomycin Sensitivity, Translational Fidelity, and Ribosome Biogenesis.

Authors:  Divya Kamath; Steven T Gregory; Michael O'Connor
Journal:  Antimicrob Agents Chemother       Date:  2017-01-24       Impact factor: 5.191

9.  Accuracy modulating mutations of the ribosomal protein S4-S5 interface do not necessarily destabilize the rps4-rps5 protein-protein interaction.

Authors:  Haritha Vallabhaneni; Philip J Farabaugh
Journal:  RNA       Date:  2009-04-22       Impact factor: 4.942

Review 10.  Ataluren as an agent for therapeutic nonsense suppression.

Authors:  Stuart W Peltz; Manal Morsy; Ellen M Welch; Allan Jacobson
Journal:  Annu Rev Med       Date:  2012-11-28       Impact factor: 13.739

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.