Literature DB >> 17033819

RNA editing site recognition in heterologous plant mitochondria.

David Choury1, Alejandro Araya.   

Abstract

RNA editing is a process that modifies the information content of mitochondrial messenger RNAs in flowering plants changing specific cytosine residues into uridine. To gain insight into editing site recognition, we used electroporation to introduce engineered wheat (Triticum aestivum) or potato (Solanum tuberosum) mitochondrial cox2 genes, and an atp9-containing chimeric gene, into non-cognate mitochondria, and observed the efficiency of editing in these contexts. Both wheat and potato mitochondria were able to express "foreign" constructs, and their products were properly spliced. Seventeen and twelve editing sites are present in the coding regions of wheat and potato cox2 transcripts, respectively. Eight are common to both plants, whereas nine are specific to wheat, and four to potato. An analogous situation is found for the atp9 mRNA coding regions from these species. We found that both mitochondria were able to recognize sites that are already present as T at the genomic level, making RNA editing unnecessary for that specific residue in the cognate organelle. Our results demonstrate that non-cognate mitochondria are able to edit residues that are not edited in their own transcripts, and support the hypothesis that the same trans-acting factor may recognize several editing sites.

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Year:  2006        PMID: 17033819     DOI: 10.1007/s00294-006-0100-3

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  42 in total

1.  Involvement of a site-specific trans-acting factor and a common RNA-binding protein in the editing of chloroplast mRNAs: development of a chloroplast in vitro RNA editing system.

Authors:  T Hirose; M Sugiura
Journal:  EMBO J       Date:  2001-03-01       Impact factor: 11.598

2.  Recognition of RNA editing sites is directed by unique proteins in chloroplasts: biochemical identification of cis-acting elements and trans-acting factors involved in RNA editing in tobacco and pea chloroplasts.

Authors:  Tetsuya Miyamoto; Junichi Obokata; Masahiro Sugiura
Journal:  Mol Cell Biol       Date:  2002-10       Impact factor: 4.272

3.  Different patterns in the recognition of editing sites in plant mitochondria.

Authors:  David Choury; Jean-Claude Farré; Xavier Jordana; Alejandro Araya
Journal:  Nucleic Acids Res       Date:  2004-12-07       Impact factor: 16.971

4.  A pentatricopeptide repeat protein is essential for RNA editing in chloroplasts.

Authors:  Emi Kotera; Masao Tasaka; Toshiharu Shikanai
Journal:  Nature       Date:  2005-01-20       Impact factor: 49.962

5.  Editing site recognition in plant mitochondria: the importance of 5'-flanking sequences.

Authors:  M A Williams; B M Kutcher; R M Mulligan
Journal:  Plant Mol Biol       Date:  1998-01       Impact factor: 4.076

Review 6.  Structure and activities of group II introns.

Authors:  F Michel; J L Ferat
Journal:  Annu Rev Biochem       Date:  1995       Impact factor: 23.643

7.  Ecotype allelic variation in C-to-U editing extent of a mitochondrial transcript identifies RNA-editing quantitative trait loci in Arabidopsis.

Authors:  Stéphane Bentolila; Anne-Laure Chateigner-Boutin; Maureen R Hanson
Journal:  Plant Physiol       Date:  2005-11-11       Impact factor: 8.340

8.  Heterologous, splicing-dependent RNA editing in chloroplasts: allotetraploidy provides trans-factors.

Authors:  C Schmitz-Linneweber; M Tillich; R G Herrmann; R M Maier
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

9.  Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.

Authors:  Claire Lurin; Charles Andrés; Sébastien Aubourg; Mohammed Bellaoui; Frédérique Bitton; Clémence Bruyère; Michel Caboche; Cédrig Debast; José Gualberto; Beate Hoffmann; Alain Lecharny; Monique Le Ret; Marie-Laure Martin-Magniette; Hakim Mireau; Nemo Peeters; Jean-Pierre Renou; Boris Szurek; Ludivine Taconnat; Ian Small
Journal:  Plant Cell       Date:  2004-07-21       Impact factor: 11.277

10.  Evidence for a site-specific cytidine deamination reaction involved in C to U RNA editing of plant mitochondria.

Authors:  W Yu; W Schuster
Journal:  J Biol Chem       Date:  1995-08-04       Impact factor: 5.157

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  5 in total

1.  Multiple specificity recognition motifs enhance plant mitochondrial RNA editing in vitro.

Authors:  Daniil Verbitskiy; Johannes A van der Merwe; Anja Zehrmann; Axel Brennicke; Mizuki Takenaka
Journal:  J Biol Chem       Date:  2008-07-01       Impact factor: 5.157

2.  Intron RNA editing is essential for splicing in plant mitochondria.

Authors:  Benoît Castandet; David Choury; Dominique Bégu; Xavier Jordana; Alejandro Araya
Journal:  Nucleic Acids Res       Date:  2010-07-08       Impact factor: 16.971

3.  The RNA editing pattern of cox2 mRNA is affected by point mutations in plant mitochondria.

Authors:  Benoît Castandet; Alejandro Araya
Journal:  PLoS One       Date:  2011-06-13       Impact factor: 3.240

4.  CRP1 Protein: (dis)similarities between Arabidopsis thaliana and Zea mays.

Authors:  Roberto Ferrari; Luca Tadini; Fabio Moratti; Marie-Kristin Lehniger; Alex Costa; Fabio Rossi; Monica Colombo; Simona Masiero; Christian Schmitz-Linneweber; Paolo Pesaresi
Journal:  Front Plant Sci       Date:  2017-02-15       Impact factor: 5.753

5.  OsPPR939, a nad5 splicing factor, is essential for plant growth and pollen development in rice.

Authors:  Peng Zheng; Yujun Liu; Xuejiao Liu; Yuqing Huang; Feng Sun; Wenyi Wang; Hao Chen; Mehmood Jan; Cuicui Zhang; Yue Yuan; Bao-Cai Tan; Hao Du; Jumin Tu
Journal:  Theor Appl Genet       Date:  2021-01-02       Impact factor: 5.699

  5 in total

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