Literature DB >> 16988441

Techniques for analysis, sorting, and dispensing of C. elegans on the COPAS flow-sorting system.

Rock Pulak1.   

Abstract

The COPAS Biosorter is a flow cytometer designed to accommodate large objects the size of Caenorhabditis elegans. This instrumentation brings high-speed automated analysis and sorting to this small model organism. The Biosort system optically analyzes and sorts living multicellular organisms on the basis of fluorescent protein expression patterns and other optical signatures, at rates up to about 100 organisms per second. The Biosort is capable of fluorescently analyzing and sorting multicellular organisms that are many-fold larger than single cells. Animals pass through a laser beam focused to the center of the flow cell. This beam is narrower than the animal so that multiple measurements are made per animal, which means that the organism is optically scanned along its long axis as it flows. Stable laminar flow in the flow cell acts to orientate the animal with the flow stream. Fluorescent locations along the axis of the animal are sequentially excited as the organism flows through the line of focus. The fluorescent properties of commonly used reagents in the research field allow the user to detect fluorescent protein expression, lectin and antibody binding, and autofluorescence. The ability to dispense organisms as they emerge from the flow cell allows for the collection of those organisms that have certain optical properties defined by the researcher. Also, dispensing allows for the precise distribution of specific numbers of animals for analysis that can vary with organism numbers.

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Year:  2006        PMID: 16988441     DOI: 10.1385/1-59745-151-7:275

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  83 in total

1.  Caenorhabditis elegans as a model in developmental toxicology.

Authors:  Windy A Boyd; Marjolein V Smith; Jonathan H Freedman
Journal:  Methods Mol Biol       Date:  2012

Review 2.  The early bird catches the worm: new technologies for the Caenorhabditis elegans toolkit.

Authors:  Xiao Xu; Stuart K Kim
Journal:  Nat Rev Genet       Date:  2011-10-04       Impact factor: 53.242

3.  Rapid selection of transgenic C. elegans using antibiotic resistance.

Authors:  Jennifer I Semple; Rosa Garcia-Verdugo; Ben Lehner
Journal:  Nat Methods       Date:  2010-08-22       Impact factor: 28.547

4.  Amelioration of metal-induced toxicity in Caenorhabditis elegans: utility of chelating agents in the bioremediation of metals.

Authors:  James M Harrington; Windy A Boyd; Marjolein V Smith; Julie R Rice; Jonathan H Freedman; Alvin L Crumbliss
Journal:  Toxicol Sci       Date:  2012-05-28       Impact factor: 4.849

5.  Toxicity ranking of heavy metals with screening method using adult Caenorhabditis elegans and propidium iodide replicates toxicity ranking in rat.

Authors:  Piper Reid Hunt; Nicholas Olejnik; Robert L Sprando
Journal:  Food Chem Toxicol       Date:  2012-07-04       Impact factor: 6.023

6.  Automated separation of C. elegans variably colonized by a bacterial pathogen.

Authors:  Kwame Twumasi-Boateng; Maureen Berg; Michael Shapira
Journal:  J Vis Exp       Date:  2014-03-21       Impact factor: 1.355

7.  MANF deletion abrogates early larval Caenorhabditis elegans stress response to tunicamycin and Pseudomonas aeruginosa.

Authors:  Jessica H Hartman; Christopher T Richie; Kacy L Gordon; Danielle F Mello; Priscila Castillo; April Zhu; Yun Wang; Barry J Hoffer; David R Sherwood; Joel N Meyer; Brandon K Harvey
Journal:  Eur J Cell Biol       Date:  2019-05-21       Impact factor: 4.492

8.  Counteracting Environmental Chemicals with Coenzyme Q10: An Educational Primer for Use with "Antioxidant CoQ10 Restores Fertility by Rescuing Bisphenol A-Induced Oxidative DNA Damage in the Caenorhabditis elegans Germline".

Authors:  Beatrix R Bradford; Nicole E Briand; Nina Fassnacht; Esabelle D Gervasio; Aidan M Nowakowski; Theresa C FitzGibbon; Stephanie Maurina; Alexis V Benjamin; MaryEllen Kelly; Paula M Checchi
Journal:  Genetics       Date:  2020-12       Impact factor: 4.562

9.  Caenorhabditis Sieve: A Low-tech Instrument and Methodology for Sorting Small Multicellular Organisms.

Authors:  Skyler Hunter; Malabika Maulik; Courtney Scerbak; Elena Vayndorf; Barbara E Taylor
Journal:  J Vis Exp       Date:  2018-07-04       Impact factor: 1.355

10.  The cation diffusion facilitator gene cdf-2 mediates zinc metabolism in Caenorhabditis elegans.

Authors:  Diana E Davis; Hyun Cheol Roh; Krupa Deshmukh; Janelle J Bruinsma; Daniel L Schneider; James Guthrie; J David Robertson; Kerry Kornfeld
Journal:  Genetics       Date:  2009-05-17       Impact factor: 4.562

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