Literature DB >> 16973410

Detection of HIV-1 proviral DNA with the AMPLICOR HIV-1 DNA Test, version 1.5, following sample processing by the MagNA Pure LC instrument.

Jeffrey J Germer1, Tara M Gerads, Jayawant N Mandrekar, P Shawn Mitchell, Joseph D C Yao.   

Abstract

BACKGROUND: The AMPLICOR HIV-1 DNA Test, version 1.5 (AMP HIV-1 DNA 1.5), is a new commercially available PCR assay for the detection of human immunodeficiency virus type 1 (HIV-1) proviral DNA in human whole blood.
OBJECTIVE: This study evaluates the performance characteristics of the assay following automated sample processing by the MagNA Pure LC instrument (MP). STUDY
DESIGN: Analytical sensitivity and reproducibility were assessed by testing replicate HIV-1 DNA dilution panels over 5 days. Clinical sensitivity and specificity were studied among 28 HIV-1 DNA-positive clinical specimens, 60 specimens from healthy blood donors, and 63 specimens from HIV-1-seropositive patients with HIV-1 RNA plasma levels ranging from <50 to >100,000 copies/mL.
RESULTS: Following MP sample processing, the assay yielded an analytical sensitivity (95% detection rate) of 66.3 copies/mL (95% CI, 50.7-106.8), with clinical sensitivity and specificity of 100%.
CONCLUSIONS: MP is a reliable, labor-saving platform capable of processing specimens for AMP HIV-1 DNA 1.5. When combined with MP sample processing, AMP HIV-1 DNA 1.5 is a sensitive and reproducible assay for the detection of HIV-1 DNA in clinical whole blood specimens. However, the current AMP HIV-1 DNA 1.5 kit configuration may result in inefficient utilization of reagents.

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Year:  2006        PMID: 16973410     DOI: 10.1016/j.jcv.2006.08.001

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  5 in total

1.  Comparison of results obtained with Amplicor HIV-1 DNA PCR test version 1.5 using 100 versus 500 microliters of whole blood.

Authors:  Estelle Piwowar-Manning; Lebah Lugalia; Bosco Kafufu; J Brooks Jackson
Journal:  J Clin Microbiol       Date:  2008-01-16       Impact factor: 5.948

2.  The stability of HIV-1 nucleic acid in whole blood and improved detection of HIV-1 in alternative specimen types when compared to Dried Blood Spot (DBS) specimens.

Authors:  Cheryl Jennings; Brian Harty; Salvatore R Scianna; Suzanne Granger; Amy Couzens; Daniel Zaccaro; James W Bremer
Journal:  J Virol Methods       Date:  2018-08-17       Impact factor: 2.014

3.  Rapid, point-of-care extraction of human immunodeficiency virus type 1 proviral DNA from whole blood for detection by real-time PCR.

Authors:  Sujit R Jangam; Douglas H Yamada; Sally M McFall; David M Kelso
Journal:  J Clin Microbiol       Date:  2009-08       Impact factor: 5.948

4.  Rapid detection of HIV-1 proviral DNA for early infant diagnosis using recombinase polymerase amplification.

Authors:  David S Boyle; Dara A Lehman; Lorraine Lillis; Dylan Peterson; Mitra Singhal; Niall Armes; Mathew Parker; Olaf Piepenburg; Julie Overbaugh
Journal:  MBio       Date:  2013-04-02       Impact factor: 7.867

5.  Diagnosis of HIV-1 infection in infants using dried blood spots in Tamil Nadu, South India.

Authors:  D Anitha; S Mini Jacob; A Ganesan; K Mary Sushi
Journal:  Indian J Sex Transm Dis AIDS       Date:  2011-07
  5 in total

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