Literature DB >> 16951416

HCOP: a searchable database of human orthology predictions.

Tina A Eyre1, Mathew W Wright, Michael J Lush, Elspeth A Bruford.   

Abstract

The HUGO Gene Nomenclature Committee (HGNC) Comparison of Orthology Predictions (HCOP) search tool combines the human, mouse, rat and chicken orthology assertions made by PhIGs, HomoloGene, Ensembl, Inparanoid, Mouse Genome Informatics (MGI) and HGNC, enabling users to identify predicted ortholog pairs for a specified gene or genes. The HCOP resource provides a useful method to integrate, compare and access a variety of disparate sources of human orthology data. The HCOP search tool, data and documentation are available at http://www.gene.ucl.ac.uk/hcop.

Entities:  

Mesh：

Year:  2006        PMID： 16951416     DOI： 10.1093/bib/bbl030

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN： 1467-5463            Impact factor:   11.622


  42 in total

1.  Fruit flies in biomedical research.

Authors:  Michael F Wangler; Shinya Yamamoto; Hugo J Bellen
Journal:  Genetics       Date:  2015-01-26       Impact factor: 4.562

2.  Species translatable blood gene signature as a marker of exposure to smoking: computational approaches of the top ranked teams in the sbv IMPROVER Systems Toxicology challenge.

Authors:  Ömer Sinan Saraç; Rahul Kumar; Sandeep Kumar Dhanda; Ali Tuğrul Balcı; İsmail Bilgen; Roberto Romero; Adi L Tarca
Journal:  Comput Toxicol       Date:  2017-04-28

3.  CpG methylation differences between neurons and glia are highly conserved from mouse to human.

Authors:  Noah J Kessler; Timothy E Van Baak; Maria S Baker; Eleonora Laritsky; Cristian Coarfa; Robert A Waterland
Journal:  Hum Mol Genet       Date:  2015-11-12       Impact factor: 6.150

4.  The sbv IMPROVER Systems Toxicology Computational Challenge: Identification of Human and Species-Independent Blood Response Markers as Predictors of Smoking Exposure and Cessation Status.

Authors:  Vincenzo Belcastro; Carine Poussin; Yang Xiang; Maurizio Giordano; Kumar Parijat Tripathi; Akash Boda; Stéphanie Boué; Mario Guarracino; Florian Martin; Manuel C Peitsch; Julia Hoeng; Roberto Romero; Adi L Tarca; Zhongqu Duan; Hao Yang; Xiaofeng Gong; Peixuan Wang; Chenfang Zhang; Wenxin Yang; Omer Sinan Sarac; Ismail Bilgen; Ali Tugrul Balci; Rahul Kumar; Sandeep Kumar Dhanda
Journal:  Comput Toxicol       Date:  2017-07-14

5.  Identification of DHODH as a therapeutic target in small cell lung cancer.

Authors:  Leanne Li; Sheng Rong Ng; Caterina I Colón; Benjamin J Drapkin; Peggy P Hsu; Zhaoqi Li; Christopher S Nabel; Caroline A Lewis; Rodrigo Romero; Kim L Mercer; Arjun Bhutkar; Sarah Phat; David T Myers; Mandar Deepak Muzumdar; Peter M K Westcott; Mary Clare Beytagh; Anna F Farago; Matthew G Vander Heiden; Nicholas J Dyson; Tyler Jacks
Journal:  Sci Transl Med       Date:  2019-11-06       Impact factor: 17.956

6.  The Putative RNA-Binding Protein Dri1 Promotes the Loading of Kinesin-14/Klp2 to the Mitotic Spindle and Is Sequestered into Heat-Induced Protein Aggregates in Fission Yeast.

Authors:  Masashi Yukawa; Mitsuki Ohishi; Yusuke Yamada; Takashi Toda
Journal:  Int J Mol Sci       Date:  2021-04-30       Impact factor: 5.923

7.  Genenames.org: the HGNC resources in 2013.

Authors:  Kristian A Gray; Louise C Daugherty; Susan M Gordon; Ruth L Seal; Mathew W Wright; Elspeth A Bruford
Journal:  Nucleic Acids Res       Date:  2012-11-17       Impact factor: 16.971

8.  ProGMap: an integrated annotation resource for protein orthology.

Authors:  Arnold Kuzniar; Ke Lin; Ying He; Harm Nijveen; Sándor Pongor; Jack A M Leunissen
Journal:  Nucleic Acids Res       Date:  2009-06-03       Impact factor: 16.971

9.  eggNOG v2.0: extending the evolutionary genealogy of genes with enhanced non-supervised orthologous groups, species and functional annotations.

Authors:  J Muller; D Szklarczyk; P Julien; I Letunic; A Roth; M Kuhn; S Powell; C von Mering; T Doerks; L J Jensen; P Bork
Journal:  Nucleic Acids Res       Date:  2009-11-09       Impact factor: 16.971

10.  The Chicken Gene Nomenclature Committee report.

Authors:  David W Burt; Wilfrid Carrë; Mark Fell; Andy S Law; Parker B Antin; Donna R Maglott; Janet A Weber; Carl J Schmidt; Shane C Burgess; Fiona M McCarthy
Journal:  BMC Genomics       Date:  2009-07-14       Impact factor: 3.969
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.