Literature DB >> 16951415

Epigenetic regulators and histone modification.

Axel Imhof1.   

Abstract

Epigenetic inheritance is a key element in the adaptation of organisms to a rapidly changing environment without stably changing their DNA sequence. The necessary changes in its gene expression profiles are frequently associated with variations in chromatin structure. The conformation of chromatin is profoundly influenced by the post-translational modification of the histone proteins, the incorporation of histone variants, the activity of nucleosome remodelling factors and the association of non-histone chromatin proteins. Although the hierarchy of these factors is still not fully understood, genetic experiments suggest that histone-modifying enzymes play a major causal role in setting up a particular chromatin structure. In this article, the recent progress that was made to understand the molecular mechanisms of the targeting and regulation of histone modifiers and its implication for epigenetic inheritance are reviewed.

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Year:  2006        PMID: 16951415     DOI: 10.1093/bfgp/ell030

Source DB:  PubMed          Journal:  Brief Funct Genomic Proteomic        ISSN: 1473-9550


  18 in total

Review 1.  Chemical and biochemical approaches in the study of histone methylation and demethylation.

Authors:  Keqin Kathy Li; Cheng Luo; Dongxia Wang; Hualiang Jiang; Y George Zheng
Journal:  Med Res Rev       Date:  2012-07       Impact factor: 12.944

2.  dCHD3, a novel ATP-dependent chromatin remodeler associated with sites of active transcription.

Authors:  Magdalena Murawska; Natascha Kunert; Joke van Vugt; Gernot Längst; Elisabeth Kremmer; Colin Logie; Alexander Brehm
Journal:  Mol Cell Biol       Date:  2008-02-04       Impact factor: 4.272

Review 3.  Epigenetics of haematopoietic cell development.

Authors:  Howard Cedar; Yehudit Bergman
Journal:  Nat Rev Immunol       Date:  2011-06-10       Impact factor: 53.106

4.  The nucleosome remodeling factor ISWI functionally interacts with an evolutionarily conserved network of cellular factors.

Authors:  Walter Arancio; Maria C Onorati; Giosalba Burgio; Marianna Collesano; Antonia M R Ingrassia; Swonild I Genovese; Manolis Fanto; Davide F V Corona
Journal:  Genetics       Date:  2010-03-01       Impact factor: 4.562

5.  Hu proteins regulate alternative splicing by inducing localized histone hyperacetylation in an RNA-dependent manner.

Authors:  Hua-Lin Zhou; Melissa N Hinman; Victoria A Barron; Cuiyu Geng; Guangjin Zhou; Guangbin Luo; Ruth E Siegel; Hua Lou
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-01       Impact factor: 11.205

6.  Polymorphism in a histone H1 subtype with a short N-terminal domain in three legume species (Fabaceae, Fabaeae).

Authors:  Oleg E Kosterin; Vera S Bogdanova; Andrey A Kechin; Olga O Zaytseva; Arseniy K Yadrikhinskiy
Journal:  Mol Biol Rep       Date:  2012-10-11       Impact factor: 2.316

7.  Direct methylation of FXR by Set7/9, a lysine methyltransferase, regulates the expression of FXR target genes.

Authors:  Natarajan Balasubramaniyan; Meena Ananthanarayanan; Frederick J Suchy
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2012-02-16       Impact factor: 4.052

8.  The CW domain, a new histone recognition module in chromatin proteins.

Authors:  Verena Hoppmann; Tage Thorstensen; Per Eugen Kristiansen; Silje Veie Veiseth; Mohummad Aminur Rahman; Kenneth Finne; Reidunn B Aalen; Rein Aasland
Journal:  EMBO J       Date:  2011-04-26       Impact factor: 11.598

9.  Genome-wide characterization of chromatin binding and nucleosome spacing activity of the nucleosome remodelling ATPase ISWI.

Authors:  Anna Sala; Maria Toto; Luca Pinello; Alessandra Gabriele; Valeria Di Benedetto; Antonia M R Ingrassia; Giosuè Lo Bosco; Vito Di Gesù; Raffaele Giancarlo; Davide F V Corona
Journal:  EMBO J       Date:  2011-03-29       Impact factor: 11.598

10.  Multiscale modeling of genome organization with maximum entropy optimization.

Authors:  Xingcheng Lin; Yifeng Qi; Andrew P Latham; Bin Zhang
Journal:  J Chem Phys       Date:  2021-07-07       Impact factor: 3.488

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