Literature DB >> 23053965

Polymorphism in a histone H1 subtype with a short N-terminal domain in three legume species (Fabaceae, Fabaeae).

Oleg E Kosterin1, Vera S Bogdanova, Andrey A Kechin, Olga O Zaytseva, Arseniy K Yadrikhinskiy.   

Abstract

A number of alleles of an orthologous gene His6 encoding histone H1 subtype f (H1-6 in pea) accumulated in chromatin of old tissues were sequenced in three legume species: seven alleles in Pisum sativum, four in Vicia unijuga and eight in Lathyrus gmelinii. In the total of 19 alleles sequenced in the three species, 29 non-synonymous substitutions and six indels were found in the coding region; most of amino acid substitutions (26 of 29) and all indels occurred in the C-terminal hydrophilic domain of the encoded protein. All species were polymorphic for some non-synonymous substitutions, V. unijuga was also polymorphic for one and P. sativum for two indels. Three near-isogenic lines of P. sativum bearing different alleles showed differences in many quantitative traits; that in the growth dynamic could be tentatively attributed to the allelic substitution of subtype H1-6. The frequencies of four electromorphs in a sampled locality of V. unijuga were found to be close to those observed 25 years ago, although their rapid change in the past was supposed in the previous study.

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Year:  2012        PMID: 23053965     DOI: 10.1007/s11033-012-1959-3

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  63 in total

1.  The Staden package, 1998.

Authors:  R Staden; K F Beal; J K Bonfield
Journal:  Methods Mol Biol       Date:  2000

2.  Distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin II: distribution in human adult fibroblasts.

Authors:  M H Parseghian; R L Newcomb; B A Hamkalo
Journal:  J Cell Biochem       Date:  2001       Impact factor: 4.429

3.  H1 family histones in the nucleus. Control of binding and localization by the C-terminal domain.

Authors:  John P H Th'ng; Rohyun Sung; Ming Ye; Michael J Hendzel
Journal:  J Biol Chem       Date:  2005-05-23       Impact factor: 5.157

Review 4.  Cracking the enigmatic linker histone code.

Authors:  James S Godde; Kiyoe Ura
Journal:  J Biochem       Date:  2008-01-30       Impact factor: 3.387

5.  In vitro binding of H1 histone subtypes to nucleosomal organized mouse mammary tumor virus long terminal repeat promotor.

Authors:  H Talasz; N Sapojnikova; W Helliger; H Lindner; B Puschendorf
Journal:  J Biol Chem       Date:  1998-11-27       Impact factor: 5.157

6.  EVOLUTIONARY SIGNIFICANCE OF THE LOSS OF THE CHLOROPLAST-DNA INVERTED REPEAT IN THE LEGUMINOSAE SUBFAMILY PAPILIONOIDEAE.

Authors:  Matt Lavin; Jeff J Doyle; Jeffrey D Palmer
Journal:  Evolution       Date:  1990-03       Impact factor: 3.694

7.  DNA- and chromatin-condensing properties of rat testes H1a and H1t compared to those of rat liver H1bdec; H1t is a poor condenser of chromatin.

Authors:  J R Khadake; M R Rao
Journal:  Biochemistry       Date:  1995-12-05       Impact factor: 3.162

8.  Condensation of dinucleosomes by individual subfractions of H1 histone.

Authors:  L W Liao; R D Cole
Journal:  J Biol Chem       Date:  1981-10-10       Impact factor: 5.157

9.  H2A.Z.2.2 is an alternatively spliced histone H2A.Z variant that causes severe nucleosome destabilization.

Authors:  Clemens Bönisch; Katrin Schneider; Sebastian Pünzeler; Sonja M Wiedemann; Christina Bielmeier; Marco Bocola; H Christian Eberl; Wolfgang Kuegel; Jürgen Neumann; Elisabeth Kremmer; Heinrich Leonhardt; Matthias Mann; Jens Michaelis; Lothar Schermelleh; Sandra B Hake
Journal:  Nucleic Acids Res       Date:  2012-03-29       Impact factor: 16.971

Review 10.  Histone variants: are they functionally heterogeneous?

Authors:  D T Brown
Journal:  Genome Biol       Date:  2001-07-05       Impact factor: 13.583

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